Query= MSMg01no450_b02.b1 MSMg01no450_b02.b1 CHROMAT_FILE:
MSMg01no450_b02.b1 PHD_FILE: MSMg01no450_b02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:19:51 2005
(246 letters)
>mm_chr1_150349213_150349858
Length = 646
Score = 468 bits (242), Expect = e-136
Identities = 245/246 (99%)
Strand = Plus / Minus
Query: 1 aaaaaatagtttagtttgcattaattagcatggtctataaattctgtacagtttatattt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 aaaaaatagtttagtttgcattaattagcatggtctataaattctgtacagtttatattt 532
Query: 61 catctaattaacttaaatttatgagttgcatacctgtttactatattacaataatacatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 catctaattaacttaaatttatgagttgcatacctgtttactatattacaataatacatt 472
Query: 121 tatatattatttatattaatttaatcctgtttatttttgagtgagtatatgtgaatctct 180
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 tatatattatttgtattaatttaatcctgtttatttttgagtgagtatatgtgaatctct 412
Query: 181 gtgtatgtatgtgagtctgtgtatttttgtgtatttgtgtatttatctttgggtgactat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 gtgtatgtatgtgagtctgtgtatttttgtgtatttgtgtatttatctttgggtgactat 352
Query: 241 gtggac 246
||||||
Sbjct: 351 gtggac 346
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 246
Length of database: 646
Length adjustment: 9
Effective length of query: 237
Effective length of database: 637
Effective search space: 150969
Effective search space used: 150969
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no450_b02.g1 MSMg01no450_b02.g1 CHROMAT_FILE:
MSMg01no450_b02.g1 PHD_FILE: MSMg01no450_b02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:19:51 2005
(565 letters)
>mm_chr1_150116619_150117583
Length = 965
Score = 1064 bits (550), Expect = 0.0
Identities = 560/564 (99%), Gaps = 3/564 (0%)
Strand = Plus / Plus
Query: 1 caggccaggaagagctacacagtgagacatcctcaaaaacaaataaacaaatatataaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 caggccaggaagagctacacagtgagacatcctcaaaaacaaataaacaaatatataaat 258
Query: 61 tataaaatgaagtttatacttctcaaaatttaaaaaaaagtattctcatttcagaagaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 tataaaatgaagtttatacttctcaaaatttaaaaaaaagtattctcatttcagaagaga 318
Query: 121 actatttaatgtccttttaatgtgactgtctttgtaaaataaattttaaaactgtgttga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 actatttaatgtccttttaatgtgactgtctttgtaaaataaattttaaaactgtgttga 378
Query: 181 gatcatatgtaatagttttcatagggtaacctattgatatctttaatttatatattgaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 gatcatatgtaatagttttcatagggtaacctattgatatctttaatttatatattgaat 438
Query: 241 ttagatatcaatatgttatatatatat--tcatttgaatagtcttctgcaggatttcatg 298
||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||
Sbjct: 439 ttagatatcaatatgttatatatatatattcatctgaatagtcttctgcaggatttcatg 498
Query: 299 gaagttttagttggatacaatgtattctttaattcagaattctttaatatattttttatt 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 gaagttttagttggatacaatgtattctttaattcagaattctttaatatattttttatt 558
Query: 359 atagatacatttatactgctggtatgcatacacacacttctaatggtccaaatatatata 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 atagatacatttatactgctggtatgcatacacacacttctaatggtccaaatatatata 618
Query: 419 catgtatttatgcaaaggacagagaacaactctgaggatcattctcaggaatgcttccca 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 catgtatttatgcaaaggacagagaacaactctgaggatcattctcaggaatgcttccca 678
Query: 479 ctttcttttttttttttaattggtattttcttcatttagatatccaatgctatcccaaaa 538
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 ctttcttttttttttt-aattggtattttcttcatttagatatccaatgctatcccaaaa 737
Query: 539 gtcccccatgccctccccccacca 562
||||||||||||||||||||||||
Sbjct: 738 gtcccccatgccctccccccacca 761
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 565
Length of database: 965
Length adjustment: 10
Effective length of query: 555
Effective length of database: 955
Effective search space: 530025
Effective search space used: 530025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
