ATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAAAGAGGATCCGCG
GAATTCCGTATTCCCGAAACTTCTCAACAGTCTGTTTTACGGGAACACTT
TATTACCACCATTCCCCAGCTGAAGAGTTCTGAATCCACACTGGATCCTT
CTCAACAGTCTGTTTTACGGGAACACTTCATTACCACCATTCCCCAGCTG
AAGAGTTCTGAATTCACGCAGTTGAATCCTTCTCAACAGTCTGTTTTACG
GTAACACTTTATTACCACCATTCCCCAGCTGAAGAGTTCTGAATCCACAC
TGGATCCTTCTCTTTTTTTTGTTTTACGGGAACACTTCATTACCACCATT
CCCCAGCTGAAGAGCTCTGAATTCACGCAGTTGAATCCTTCTCAACAGTC
TGTTTTACAGGAACACTTCATTACCACCGTTCCCCAGCTGAAGAGCTCTG
AATTCACGCAGTTGAATCCTTCTCAACAGTCTGTCTTACGGGAACACTTC
ATTACCATCATTCCCCAGCTGAAGAGTTCTGAATCCACACAGTATCCTTC
TCAACAGTCTGCCTTACGGCAACCTTTATGATTGTGACCCGCAGTTCTGT
CTTCCGCCATGACCCACCTTCTCTTGCTTCATTGATGCCATTCGCCCCGT
TTTCTTTTTCCTCCCCTTCCTGCTTTCCCCTTCCTATTCTCTACACCCGT
TTTATTCCTTTCGCTTTATTATTCACTCCCTTCTCTTCCTATTTCCTTTC
CCTCCC

CGAATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXCCCTATACTAGGGCATAGGACCAAG
GGCCTCTCCTCCCATTGATGACTGACTAGGCCATCCTCTGCTACATATAT
AGCTAGAGCCACAAGTTCCAACATGTGCTTTCTTTGATTAGTGGTATAGT
TCCAAGGAGCTCTCGGGGTACTGGTTAGTTCATATTAATGTTCCTCCTAT
AGGGCTTCAGTCCCCTTCCTCCCTGGCTCTCTGGCTCCTTCATTCATTCA
TTGGATGGAGCACATGTTTGTTTTTTGATACAGAATCTCACTTGACCCAG
AATGGCATTAAATGTACTATGCAACCTGGATTGCCTGCATCCATATTTCA
ACCTTCCTGTCTCTGGCTCTTGATTCAGGTATCATATGTGTGAACCACCC
TAACAAAAATGATTTCTACTATTAAGGACTTGGCAAATAAATCATTTAAA
ACATTATTGGTATTATAAATATTGTAATACATTGCTATTAAAATTTATTC
AAATAAAATAATTTTGGTAATACATGGATTAATTATCCCAAAGACTTATT
GTTTGCATGGTTGATATCTAACAAGGAATGTTTTAAAAGAAGAGGTAGGC
TGTTCTACTTGAGCTTGACATCCACCTGCTTCCACAGTGAGTTCCAGGCT
TGCCAGGGCTACCTAGTGAGACTTCTCCTAATCCATTACCAATAATATT

Query= MSMg01no450_i16.g1 MSMg01no450_i16.g1 CHROMAT_FILE:
MSMg01no450_i16.g1 PHD_FILE: MSMg01no450_i16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:20:30 2005
         (571 letters)



>mm_chr1_27356023_27356993
          Length = 971

 Score = 1083 bits (560), Expect = 0.0
 Identities = 566/568 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   ccctatactagggcataggaccaagggcctctcctcccattgatgactgactaggccatc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccctatactagggcataggaccaagggcctctcctcccattgatgactgactaggccatc 260

                                                                       
Query: 61  ctctgctacatatatagctagagccacaagttccaacatgtgctttctttgattagtggt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctctgctacatatatagctagagccacaagttccaacatgtgctttctttgattagtggt 320

                                                                       
Query: 121 atagttccaaggagctctcggggtactggttagttcatattaatgttcctcctatagggc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atagttccaaggagctctcggggtactggttagttcatattaatgttcctcctatagggc 380

                                                                       
Query: 181 ttcagtccccttcctccctggctctctggctccttcattcattcattggatggagcacat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttcagtccccttcctccctggctctctggctccttcattcattcattggatggagcacat 440

                                                                       
Query: 241 gtttgttttttgatacagaatctcacttgacccagaatggcattaaatgtactatgcaac 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtttgttttttgatacagaatctcacttgacccagaatggcattaaatgtactatgcaac 500

                                                                       
Query: 301 ctggattgcctgcatccatatttcaaccttcctgtctctggctcttgattcaggtatcat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctggattgcctgcatccatatttcaaccttcctgtctctggctcttgattcaggtatcat 560

                                                                       
Query: 361 atgtgtgaaccaccctaacaaaaatgatttctactattaaggacttggcaaataaatcat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atgtgtgaaccaccctaacaaaaatgatttctactattaaggacttggcaaataaatcat 620

                                                                       
Query: 421 ttaaaacattattggtattataaatattgtaatacattgctattaaaatttattcaaata 480
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttaaaatattattggtattataaatattgtaatacattgctattaaaatttattcaaata 680

                                                                       
Query: 481 aaataattttggtaatacatggattaattatcccaaagacttattgtttgcatggttgat 540
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aaataattttggtaatatatggattaattatcccaaagacttattgtttgcatggttgat 740

                                       
Query: 541 atctaacaaggaatgttttaaaagaaga 568
           ||||||||||||||||||||||||||||
Sbjct: 741 atctaacaaggaatgttttaaaagaaga 768


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 571
Length of database: 971
Length adjustment: 10
Effective length of query: 561
Effective length of database: 961
Effective search space:   539121
Effective search space used:   539121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)