Query= MSMg01no451_p18.b1 MSMg01no451_p18.b1 CHROMAT_FILE:
MSMg01no451_p18.b1 PHD_FILE: MSMg01no451_p18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:22:25 2005
(655 letters)
>mm_chr1_190156488_190157542
Length = 1055
Score = 1156 bits (598), Expect = 0.0
Identities = 637/650 (98%)
Strand = Plus / Plus
Query: 5 gaattccttagttacgtagagttctttgtctggagttggtcctgtctctgtccatcaaac 64
||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| |
Sbjct: 205 gaattccttagttacgtagagttctttgtctggggttggtcctgtctctatccatcaagc 264
Query: 65 atgtgctcagacttccacctgctttcagctgctccagagagttggtcttaaagggacagg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 atgtgctcagacttccacctgctttcagctgctccagagagttggtcttaaagggacagg 324
Query: 125 gagctcaactgccctgtgtgtctctgaattggcttctcttgtgtgactgtactaaaacac 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gagctcaactgccctgtgtgtctctgaattggcttctcttgtgtgactgtactaaaacac 384
Query: 185 gctgatcaaggccacttaagggagaaagggttcactttaggttacaatccttagatggtc 244
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 385 gctgatcaaggccacttaagggagaaagggtttactttaggttacaatccttagatggtc 444
Query: 245 taagttcatcacagcagggattccctgacagcaggaacatgagtctgacgtaccatgtct 304
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 445 taagttcatcacagcagggattccctgacagcaggaacatgagtctgacttaccatgtct 504
Query: 305 gtggtcagtgagggtaggaagtgaagccattctgtaaatcccaaagactaccccagtaac 364
|||||||||||| |||| ||||||||||| ||||||| ||||||||||||||||||||||
Sbjct: 505 gtggtcagtgagagtagaaagtgaagccagtctgtaactcccaaagactaccccagtaac 564
Query: 365 ctgtgttctcccacagcgctccacagcattccctagcagcacagtggtctgggagagttc 424
||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
Sbjct: 565 ctgcgttctcccacagcgctccagagcattccctagcagcacagtggtctgggagagtcc 624
Query: 425 gagcctgtggggaatggtcctcattcaaacctgcctgttaacacagaggtggggttgagg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gagcctgtggggaatggtcctcattcaaacctgcctgttaacacagaggtggggttgagg 684
Query: 485 gtgaagctacagccccagaacataactgtgacaggatggaatgctgcagaaggaattcta 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gtgaagctacagccccagaacataactgtgacaggatggaatgctgcagaaggaattcta 744
Query: 545 aaggctgaccttcacaaagatgcgtagatttcaagaaaatggggaaaaacaataggatag 604
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 aaggctgaccgtcacaaagatgcgtagatttcaagaaaatggggaaaaacaataggatag 804
Query: 605 agttaagaaggtccagtaacgaacaagttcaatactgggatgggctctga 654
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 agttaagaaggtccagtaacgaacaagttcaatactgggatgggctctga 854
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 655
Length of database: 1055
Length adjustment: 10
Effective length of query: 645
Effective length of database: 1045
Effective search space: 674025
Effective search space used: 674025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no451_p18.g1 MSMg01no451_p18.g1 CHROMAT_FILE:
MSMg01no451_p18.g1 PHD_FILE: MSMg01no451_p18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:22:25 2005
(526 letters)
>mm_chr1_190317583_190318508
Length = 926
Score = 692 bits (358), Expect = 0.0
Identities = 383/396 (96%), Gaps = 10/396 (2%)
Strand = Plus / Minus
Query: 1 tctggttaaaaacaa-taaa--------ctggtagaccacaatctaggcatcaagatagc 51
||||||||||||||| |||| ||||||||||||||||||||||||||||||||
Sbjct: 395 tctggttaaaaacaattaaactcaacacctggtagaccacaatctaggcatcaagatagc 336
Query: 52 tgtcacagattcaaagacagagttggtatcatttcaagagtaatatagcaaagatagctt 111
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tgtcacagattcaaagacagagttggtatcatttcaagagtaatatagcaaagatagctt 276
Query: 112 actgctcatggatacttcaatcacatctttaatctttaaaatgaattgttttccttggca 171
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 actgctcatggatacttcaatcacatctttaatctttaaaatgaattgttttccttggca 216
Query: 172 tggtgttgtatgcctgtaatctcagtatatagggaccagagagaagaagagtaggaattc 231
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 215 tggtgttgtatgcctgtaatctcagtatatagggaccagagagaagaagagaaggaattc 156
Query: 232 aaggttattcttggttacatagggagtttgtttagtgtcagctatataaaatactgctta 291
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 aaggttattcttggctacatagggagtttgtttagtgtcagctatataaaatactgctta 96
Query: 292 aatataagtattagcgctggagagacagctagtgaataagtgtactacttttacagagac 351
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95 aatataa-tattagcgctggagagacagctagtgaataagtgtactacttttacagagat 37
Query: 352 tgcagttggtttctaacaaccacagcaggcagacta 387
||||||||||||||||||||||||||||||||||||
Sbjct: 36 tgcagttggtttctaacaaccacagcaggcagacta 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 526
Length of database: 926
Length adjustment: 10
Effective length of query: 516
Effective length of database: 916
Effective search space: 472656
Effective search space used: 472656
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
