Query= MSMg01no452_b07.b1 MSMg01no452_b07.b1 CHROMAT_FILE:
MSMg01no452_b07.b1 PHD_FILE: MSMg01no452_b07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:22:32 2005
(438 letters)
>mm_chr1_107316228_107317065
Length = 838
Score = 801 bits (414), Expect = 0.0
Identities = 417/418 (99%)
Strand = Plus / Minus
Query: 5 gaattctctgtgctctgccacctaacaaaactagaccgtctgtttctgtccactcagcac 64
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 568 gaattctctgtgctctgccacctaacaaaactagaacgtctgtttctgtccactcagcac 509
Query: 65 ttagtagggagccattaacacctttgtcaaacatcatctggggccagatttgatgcagaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 ttagtagggagccattaacacctttgtcaaacatcatctggggccagatttgatgcagaa 449
Query: 125 acacaaattgaagcacagacagagaactagttaggggcaaaaagaaagaacaaagcaaca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 acacaaattgaagcacagacagagaactagttaggggcaaaaagaaagaacaaagcaaca 389
Query: 185 caaaagttgtaccgctgcatgagattcactctgaagacgagaagacagcacaggcctcaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 caaaagttgtaccgctgcatgagattcactctgaagacgagaagacagcacaggcctcaa 329
Query: 245 gcagtgcacaaggctgctgaagaccttagggaaccagttaacttaggtaaggcaggtaag 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 gcagtgcacaaggctgctgaagaccttagggaaccagttaacttaggtaaggcaggtaag 269
Query: 305 ggggagagtaaaaccgagtgtctcccattttgtgtgtgtgtcctctcttctcccctcccc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 ggggagagtaaaaccgagtgtctcccattttgtgtgtgtgtcctctcttctcccctcccc 209
Query: 365 ttcctgtatgtatgtatgtatgtatgtatgtatgtatgtatgtatgtatgtatgtatg 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 ttcctgtatgtatgtatgtatgtatgtatgtatgtatgtatgtatgtatgtatgtatg 151
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 46
Number of extensions: 16
Number of successful extensions: 16
Number of sequences better than 10.0: 1
Number of HSP's gapped: 15
Number of HSP's successfully gapped: 1
Length of query: 438
Length of database: 838
Length adjustment: 9
Effective length of query: 429
Effective length of database: 829
Effective search space: 355641
Effective search space used: 355641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no452_b07.g1 MSMg01no452_b07.g1 CHROMAT_FILE:
MSMg01no452_b07.g1 PHD_FILE: MSMg01no452_b07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:22:32 2005
(642 letters)
>mm_chr1_107130170_107131212
Length = 1043
Score = 1189 bits (615), Expect = 0.0
Identities = 636/643 (98%), Gaps = 1/643 (0%)
Strand = Plus / Plus
Query: 1 ttaaggaagatttgttctccctcagctcacctccaacattcaagatgtgcagcgtcttca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttaaggaagatttgttctccctcagctcacctccaacattcaagatgtgcagcgtcttca 260
Query: 61 taaactcggcttcctttcagcacttgtatagatttattcccaatccatcagcatcagcag 120
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 261 taaactcggcttcctttcagcacttgtatagatttattcccaatccgtcagcatcagcag 320
Query: 121 gacactatctgttgtttttcaccttctggaaagcactctatctcaaacactgatgggtga 180
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 321 gacactatctgttgtttttcaccttctggaaagcactctatctcagacactgatgggtga 380
Query: 181 gacctgggctttttcaactgtctccagtccctcaagacttggacaccacattccctttac 240
| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 381 gtcctgggctttttcaactgtctccagttcctcaagacttggacaccacattccctttac 440
Query: 241 tgagccagagtaatgctactcaaggtgtaaggctgggttggttaatggtccatcttattt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgagccagagtaatgctactcaaggtgtaaggctgggttggttaatggtccatcttattt 500
Query: 301 gacaaattaaagcttggatttaggtattagtgtcaatactactgccttctcactagctca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gacaaattaaagcttggatttaggtattagtgtcaatactactgccttctcactagctca 560
Query: 361 ctaatggtgttgggaaaaaaatgtaattgcttacaatgatagtatggtattgactacagt 420
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctaatggcgttgggaaaaaaatgtaattgcttacaatgatagtatggtattgactacagt 620
Query: 421 cttttttttt-cagaaactgaaaaaatactcctcaatatttgcaggtttctaatgaagtg 479
|||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 621 cttttttttttcagaaactgaaaaaatactcttcaatatttgcaggtttctaatgaagtg 680
Query: 480 ttaactaattttagaatgttcaaccatgggtctagtaaaatcatttaaaagctttattgt 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttaactaattttagaatgttcaaccatgggtctagtaaaatcatttaaaagctttattgt 740
Query: 540 tttccagtgacacatacagagatttatctaagcatgtgcaagtggaactttagggaaagg 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tttccagtgacacatacagagatttatctaagcatgtgcaagtggaactttagggaaagg 800
Query: 600 gggagttcactctacttttctgtcatcagaaagaaacttttta 642
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 gggagttcactctacttttctgtcatcagaaagaaacttttta 843
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 642
Length of database: 1043
Length adjustment: 10
Effective length of query: 632
Effective length of database: 1033
Effective search space: 652856
Effective search space used: 652856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
