Query= MSMg01no452_n05.b1 MSMg01no452_n05.b1 CHROMAT_FILE:
MSMg01no452_n05.b1 PHD_FILE: MSMg01no452_n05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:23:30 2005
(632 letters)
>mm_chr1_51738826_51739861
Length = 1036
Score = 1189 bits (615), Expect = 0.0
Identities = 627/633 (99%), Gaps = 4/633 (0%)
Strand = Plus / Plus
Query: 4 ggaattcccctactgtgctttaagtcaggccttaaatctcagtttggggtctctccattt 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcccctactgtgctttaagtcaggccttaaatctcagtttggggtctctccattt 263
Query: 64 ttgtagatggtagaccccaacatgctgaacttctacagaataaaacactctttgctttta 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ttgtagatggtagaccccaacatgctgaacttctacagaataaaacactctttgctttta 323
Query: 124 catacgatttgagtcctgggtatcactcttcagtgaatgatggacccttacaagtccaca 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 catacgatttgagtcctgggtatcactcttcagtgaatgatggacccttacaagtccaca 383
Query: 184 cacatgagaaactacatagcaagcatcagggtcactgggaaaaggcagcattaacatacc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 cacatgagaaactacatagcaagcatcagggtcactgggaaaaggcagcattaacatacc 443
Query: 244 atgagtcagcactccacactactcaataatgggtgtttaaatcctgccagcagcaagtgt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 atgagtcagcactccacactactcaataatgggtgtttaaatcctgccagcagcaagtgt 503
Query: 304 gactgtgaaacaacaaaaggcgtccacaggggtgggggtggggagaggcagcatagggca 363
| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 504 ggctgtgaaacaacaaaaggcgtccacaggggtgggggtggggagaggcagcacagggca 563
Query: 364 cccacgttgaaaacctgcttgttggcattttatcccgtgtttcagcaccttcccgtggtt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 cccacgttgaaaacctgcttgttggcattttatcccgtgtttcagcaccttcccgtggtt 623
Query: 424 gctttccaaagagccataaaaactatgttcacatgaaaatctgtatgcatatattaactg 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 gctttccaaagagccataaaaactatgttcacatgaaaatctgtatgcatatattaactg 683
Query: 484 gtcttatttaaaacattcatgtaaaaaaaaaa----gagaaaccacttgtatgcgttact 539
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 684 gtcttatttaaaacattcatgtaaaaaaaaaaaagagagaaaccacttgtatgcgttact 743
Query: 540 ttttgtcactgttattattctgttattgtgataaaataccatggccaaggcagtttacag 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 ttttgtcactgttattattctgttattgtgataaaataccatggccaaggcagtttacag 803
Query: 600 aagacagagtttatttagacccacagttccaga 632
|||||||||||||||||||||||||||||||||
Sbjct: 804 aagacagagtttatttagacccacagttccaga 836
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 632
Length of database: 1036
Length adjustment: 10
Effective length of query: 622
Effective length of database: 1026
Effective search space: 638172
Effective search space used: 638172
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no452_n05.g1 MSMg01no452_n05.g1 CHROMAT_FILE:
MSMg01no452_n05.g1 PHD_FILE: MSMg01no452_n05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:23:30 2005
(671 letters)
>mm_chr1_51894386_51895457
Length = 1072
Score = 1226 bits (634), Expect = 0.0
Identities = 661/670 (98%), Gaps = 3/670 (0%)
Strand = Plus / Minus
Query: 4 agggtggttgaaatgctctgggattcgggatcacatgggagggaatgccagtttgagagc 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 872 agggtggttgaaatgctctgggattcgggatcacatgggagggaatgccagtttgagagc 813
Query: 64 cttggaggatgagcacttgaaactggatggtggaatcatttatctgagttcaggagattt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 812 cttggaggatgagcacttgaaactggatggtggaatcatttatctgagttcaggagattt 753
Query: 124 ttctgaaacagattctcttctgttaaaccctagttaagggagcgatccaactgcgagtgc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 752 ttctgaaacagattctcttctgttaaaccctagttaagggagcgatccaactgcgagtgc 693
Query: 184 tcggaacagactgggtgtgttttccagccacccatttgggcagagctggagacactgaaa 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 tcggaacagactgggtgtgttttccagccacccatttgggcagagctggagacactgaaa 633
Query: 244 cccgggctactcttgggcctgtgtgtctgggtatcggtggtgtcacggtgaagcgaatag 303
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 632 cccgggctactcttgggcctgtgtgcctgggtatcggtggtgtcacggtgaagcgaatag 573
Query: 304 ctcagtcttttctgctctgcac-tcgaggtgaaacaaacttgccaaggaaatggcagggt 362
|||||||||||||||||||||| | ||||||||||||||||| |||||||||||||||||
Sbjct: 572 ctcagtcttttctgctctgcacat-gaggtgaaacaaacttggcaaggaaatggcagggt 514
Query: 363 ggagagcagagagtgtggagaaggaagccctgccattcccctgatgaccacgtgggcagc 422
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 513 ggagagcagagagtgtggagaaggaagccctgccattcccctgatggccacgtgggcagc 454
Query: 423 accactatgattagcactctcgagtagaaataaggcagaggaaggacataaataccagct 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 accactatgattagcactctcgagtagaaataaggcagaggaaggacataaataccagct 394
Query: 483 gggctctttgcagcatgcaacccaccattctaccctcatagaaaatgactgatgagcccc 542
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 393 gggctctttgcagcatgcaacccaccattctaccctcatagaaaatgacagatgagcccc 334
Query: 543 aaaccaaactttt-gaaactgaatcatggtaatagtcagagctgtttcaaaatgcacagt 601
||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 333 aaaccaaactttttgaaactgaatcctggtaatagtcagagctgtttcaaaatgcacagt 274
Query: 602 ggaggatggtatcttggtgcttgctgggcaaaaaagtttggtgctcaggaagcagctggg 661
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 273 ggaggatggtatcttggtgcttgctgggcaaaaaggtttggtgctcaggaagcagctggg 214
Query: 662 tggctgatct 671
||||||||||
Sbjct: 213 tggctgatct 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 671
Length of database: 1072
Length adjustment: 10
Effective length of query: 661
Effective length of database: 1062
Effective search space: 701982
Effective search space used: 701982
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
