Query= MSMg01no453_b21.b1 MSMg01no453_b21.b1 CHROMAT_FILE:
MSMg01no453_b21.b1 PHD_FILE: MSMg01no453_b21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:23:53 2005
(642 letters)
>mm_chr1_31437074_31438117
Length = 1044
Score = 592 bits (306), Expect = e-173
Identities = 321/326 (98%), Gaps = 4/326 (1%)
Strand = Plus / Minus
Query: 5 gaatt-actatatctcttcctgtgctttc-atacatctgttttgtggtctcttccttgcc 62
||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 326 gaattcactatatctcttcctgtgctttcaatacatctgttttgtggtctcttccttgcc 267
Query: 63 tagagtctgttagaactgtgtatctgacctccctattgcctgcgtactctcagtgctttg 122
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 tagagtctgttagaaccgtgtatctgacctccctattgcctgcgtactctcagtgctttg 207
Query: 123 catatgtgtgtgtccccaacaaa-ggggttttttt-tgctctatattttttgaacaacac 180
||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 206 catatgtgtgtgtccccaacaaagggggtttttttctgctctatattttttgaacaacac 147
Query: 181 agaaaccatcacatggggaaaagaatgagggatacttggtggaaatatttagccctgtta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 agaaaccatcacatggggaaaagaatgagggatacttggtggaaatatttagccctgtta 87
Query: 241 aatttttccagctgaccccaatcaaccccaaactctcacgactgcaaacacgactatcaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86 aatttttccagctgaccccaatcaaccccaaactctcacgactgcaaacacgactatcaa 27
Query: 301 gtaatatcaaaacgttgttcccaaca 326
||||||||||||||||||||||||||
Sbjct: 26 gtaatatcaaaacgttgttcccaaca 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 642
Length of database: 1044
Length adjustment: 10
Effective length of query: 632
Effective length of database: 1034
Effective search space: 653488
Effective search space used: 653488
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no453_b21.g1 MSMg01no453_b21.g1 CHROMAT_FILE:
MSMg01no453_b21.g1 PHD_FILE: MSMg01no453_b21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:23:53 2005
(657 letters)
>mm_chr1_31232318_31233374
Length = 1057
Score = 1176 bits (608), Expect = 0.0
Identities = 644/656 (98%), Gaps = 4/656 (0%)
Strand = Plus / Plus
Query: 4 agttctatatgctcgctcactggtgccttag-cttgattcagaagaaactctctctgttt 62
|||||| |||||||||||||||||||||| | ||||||||||||||||||||||||||||
Sbjct: 204 agttctgtatgctcgctcactggtgcctttggcttgattcagaagaaactctctctgttt 263
Query: 63 gttctagcaacctgtagttgtg-ttggagtatggaggaaatgggatttctaccctcttga 121
|||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||
Sbjct: 264 gttctagcaacctgtagttgtggttggggtatggaggaaatgggatttctaccctcttga 323
Query: 122 gtcttctagagaaagtgctccccattgattctggtggagcttgggttgctgcagacttct 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gtcttctagagaaagtgctccccattgattctggtggagcttgggttgctgcagacttct 383
Query: 182 tcaatgaggataatgaggatggcctgggatgtgttagaaaggctaaagaaagacagcctt 241
||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct: 384 tcaatgaggataatgaggatggcctgggatgtgttagaaaggctaaagaaagata-cctt 442
Query: 242 agtatagtgatagaatgaagggtcagcataacctggaggcaaaaaggtccctaccatgga 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 agtatagtgatagaatgaagggtcagcataacctggaggcaaaaaggtccctaccatgga 502
Query: 302 aagaaagtatgtgaattacaagcatggtacaaatctatgtctttcagagccctggttttt 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 aagaaagtatgtgaattacaagcatggtacaaatctatgtctttcagagccctggttttt 562
Query: 362 ctatttgtatttttatctgtggctttgataacacagctgtctaaaaaatgtttctccacc 421
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 ctatttgtatttttgtctgtggctttgataacacagctgtctaaaaaatgtttctccacc 622
Query: 422 tgattattacaataggtttaattccagaacacgactgttacataacaaagagtcaatagg 481
||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 623 tgattattacaatagatttaattccagaacacgactgttacataacaaagaatcaatagg 682
Query: 482 ttggaagggaaataaaaaaagtcacacagttttaagctttgtgtccctttgtttgcaggg 541
||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 ttggaggggaaataaaaaa-gtcacacagttttaagctttgtgtccctttgtttgcaggg 741
Query: 542 agtcaggcataaatgagcatttgctgctgggctattctagggcatggctcatatcctgtg 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 agtcaggcataaatgagcatttgctgctgggctattctagggcatggctcatatcctgtg 801
Query: 602 ccttgggcatgacagagtctgtgtttatcttttattacctgctggatccccctgga 657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 ccttgggcatgacagagtctgtgtttatcttttattacctgctggatccccctgga 857
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 657
Length of database: 1057
Length adjustment: 10
Effective length of query: 647
Effective length of database: 1047
Effective search space: 677409
Effective search space used: 677409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
