NAATCTATATTTTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCTCTAAGCTTAAACTGCTTTAAGTCCATTTCTTCAAAACACAGT
GTAACTAAATATAACTAAATTTGAATTTTCAGACTGAATTATTTAAAAGT
CACAAAAATTATTATGATAAACTATATATATAGGGAGGGGCAGAGGGAGA
GGAAAGGAGAGAATAACACATATTCTAGGTTTCAAAGATTTCTTCATATT
CTGGACAGATAAATGTGTGGGTAAAGTGTTTGCCATGAAAATCTAAGGAT
ATGAGTTTGATTCCCCAGCACTCATGTCAAATGCCAGGCGACATCAGTGT
GTATCTGTAATTCCAGTGTTGAAAAAGCTGAGACAGAGGCCCAGTCCAGC
CAGTCACTAAGCCCCAGATTTCTTGCCTCACTTAGCATTTTTGTACATGA
TAAAAGTCAAACCAATTACTAGTACAATAGAAACTTCCAGGAATATACAA
GGATGATCCTAGCTAAGACTCCTAGCAATGGGGATACGATGCCTGAACTA
GCTAGTAATCTTCTGATAGATGGCAAGACTTCCAGAGAAGGGATTGGGAC
ACCAACCTAGCCATATAACCTTTGACCTATAATTAGTCATGCTTTCCGGA
CAAACTGGGGTAAAGAGAAATTGTGGGAGTAGGAAATCAGTGACTAGTCC
AGCCTAAGTCTTAGAACGTGAGAGAAAGCCCCTGAGACTGCCTGGAGGCT
CA

NCCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXAACACACCACTTTCATCAAAG
GACAGATTGTGGAAACAGAAACTAAACAGGGACACAGTGAAACTAACAGA
AGTTATGAAACAAATGGACTTAACAGATATCTACAGAACATTTTATTCTA
AAACAAAAGGATATACCTTCTTCTCAGCACCTCATGGTACCTTCTCCAAA
GTTGACCGTATAATTGGTCAAGAAACAAGCCTCAACATATACAAAAATAT
TGAAATTGTCCCAAACATCCTATCAGACCACCATGGACTAAGGCTGATCT
TCAATAACAACATAAATAATGGAAAGCCAATATTCACGTGGAAAACGAAC
AACAGTCTTCTCAATGATACCTTGGTCAAGGAAGGAATAAAGAAAGAAAT
TAGAAACTTTTTAGGGTTTAATGAAAATGAAGCCACAACATACCCAAACA
TATGGGACACAATGAAAGCATTTCTAAGAGGGAAACTCATAGCTCTGAGT
GCTTCCAAGAAGAAACTAGAGAGAGCACACACTAGCAGCTTGACAACACA
CCTAAAAGCTCTAGCAAAAAAGGAAGCAAATTCACCCAAGAGGAGTAGAC
GGCAGGAAATAATCAAACTCTGGGGTGAAATCAACTAAGTGGAAACAAGA
AGAACTATTCAATGAATCAACCAAACGAGGAGCTGGTTCTTTGAGAAATC
AACAAGAT

Query= MSMg01no453_j19.b1 MSMg01no453_j19.b1 CHROMAT_FILE:
MSMg01no453_j19.b1 PHD_FILE: MSMg01no453_j19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:24:33 2005
         (676 letters)



>mm_chr1_30626128_30627203
          Length = 1076

 Score = 1245 bits (644), Expect = 0.0
 Identities = 665/672 (98%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctctaagcttaaactgctttaagtccatttcttcaaaacacagtgtaactaaata 64
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 205 gaattctctaagcttaaactgctttaagtccatttcctcaaaacacagtgtaactaaata 264

                                                                       
Query: 65  taactaaatttgaattttcagactgaattatttaaaagtcacaaaaattattatgataaa 124
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 265 taactaaatttgaattttcagactgaattatttaaaagtcacaaaaattattatgaaaaa 324

                                                                       
Query: 125 ctatatatatagggaggggcagagggagaggaaaggagagaataacacatattctaggtt 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ctatatatatagggaggggcagagggagaggaaaggagagaataacacatattctaggtt 384

                                                                       
Query: 185 tcaaagatttcttcatattctggacagataaatgtgtgggtaaagtgtttgccatgaaaa 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tcaaagatttcttcatattctggacagataaatgtgtgggtaaagtgtttgccatgaaaa 444

                                                                       
Query: 245 tctaaggatatgagtttgattccccagcactcatgtcaaatgccaggcgacatcagtgtg 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tctaaggatatgagtttgattccccagcactcatgtcaaatgccaggcgacatcagtgtg 504

                                                                       
Query: 305 tatctgtaattccagtgttgaaaaagctgagacagaggcccagtccagccagtcactaag 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 505 tatctgtaattccagtgttgaaaaagctgagacagaggcccagtccagccagtcactgag 564

                                                                       
Query: 365 ccccagatttcttgcctcacttagcatttttgtacatgataaaagtcaaaccaattacta 424
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tcccagatttcttgcctcacttagcatttttgtacatgataaaagtcaaaccaattacta 624

                                                                       
Query: 425 gtacaatagaaacttccaggaatatacaaggatgatcctagctaagactcctagcaatgg 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gtacaatagaaacttccaggaatatacaaggatgatcctagctaagactcctagcaatgg 684

                                                                       
Query: 485 ggatacgatgcctgaactagctagtaatcttctgatagatggcaagacttccagagaagg 544
           |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| 
Sbjct: 685 ggatacgatgcctgaactagctagtaatctcctgatagatggcgagacttccagagaaga 744

                                                                       
Query: 545 gattgggacaccaacctagccatataacctttgacctataattagtcatgctttccggac 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 gattgggacaccaacctagccatataacctttgacctataattagtcatgctttccggac 804

                                                                       
Query: 605 aaactggggtaaagagaaattgtgggagtaggaaatcagtgactagtccagcctaagtct 664
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 aaactggggtaaagagaaattgtgggagtaggaaatcagtgactagtccagcctaagtct 864

                       
Query: 665 tagaacgtgaga 676
           ||||||||||||
Sbjct: 865 tagaacgtgaga 876


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 676
Length of database: 1076
Length adjustment: 10
Effective length of query: 666
Effective length of database: 1066
Effective search space:   709956
Effective search space used:   709956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)