CTTAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTACTATATATGACAGGCTGGGTTGGAAATCATAGAGATCTGCCTGCC
TCTACCTCCTGGAATTAAAGGCATACGTTGCCACGCCCAGCTTATTTTAT
TATTTTTTTCAAAGTATCACTATATATCATTGGCTGGCCGGGAACTCATA
GAGATTGATACATATGCCTCTGCCTTTTGAGTTATTTGCTTATTTTTTTT
GAGACAGTGCCTTATTCTGTAGTACAGGCTGCCTAGAACTGACTATATAG
CTTATGCTAGCCTCAAACTCATGCTCCCCGTTGCCTCGACCTCTCCAGTG
CTAGAGTTGCAGATATTTTTCAGCTGAGCTAAACTCTGGTGCCATTGGAT
CATAGTTAATGCTATGGCCACATTACAACTTGTCATTAACAAATGCCTGG
GACCAGAAAACCTAGTACAGGGCTTGAGTGCTGTTTCAATCTGTTTCCTC
TTTGTGCTGCTCGCTCCGTTAGTTGTACATTTTCTGCCCCTTCTAGGAAT
GTCTGCGTGGCTGGAAGGTGGTGCCTTCCAAACTGACAGTTCTAGGAAAA
GCAAGATCATAGCCTAATTGTCTGAAAGTGGAGCAGGGAATTTATAAATG
TACTTTGAGAACTCCTGCATTGCAAATTGGTTATTTTGGGGGACTGGCTT
GTCCCCAAACACTCTGACTGGGACTAATAACTAATCATCTCTGGGGCATT
ANGAAGG

CATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXCTTATAACCCCACGAGACAAGGAATA
GTTGAACGTGCTCATTGCACTTTAAAAGATTGGCTTTAAAAACAAAACAA
GGGCAGTTATATCCCCCAAGGTCACCAAAGGCACATCTTGCTTTTGCTTT
ATTTGTTCTAAATTTTTTTGCAAACTGATGTTAAAGGTCAGTCTGCAGCG
TATGTCACTGGCATCCGGTTACTTCTAGTTCTTATGCCATTAGTAAAGTG
GCGGGACCCATTAACTAACAAATGGAAGGGTTCAGACCCAGTCCTAATCT
GGGGAAGGGGCTCAGTCTGTGTTTTTTTCACAAAAAGAAGATGGAGCACG
ATGGCTGCCTGAGAGATTAGTTTGTCAATTGGACACAGATCCTGAATCTT
CTAGTAAGTATGACTCTAACCTTGAATATGGCTAAAAATCTCCTTTAGCT
GAAAAGTTAAATTGGAGCACAGCCTCCACTCCCAGAGAAGCTGCAGCCTT
TCTGCAATTCTCAAAGTCACCTCCCCCACACTGGGAGCTCTAAGTCTAAG
CCTGATTGTTGCTAATTTGCAATTGAGGGGAGTACCTGGACTTTCCTAAA
GAAGCTTTTGTACTGTTCCTTTTCACTGTCTCACCTTTGTTTTTCAAGCA
GGTCAGTCAATGCCCTTCAGCCTGACTGCAGCAGGTGTGCATCCCCGCCT
CCAACAGCACAAG

Query= MSMg01no453_m17.b1 MSMg01no453_m17.b1 CHROMAT_FILE:
MSMg01no453_m17.b1 PHD_FILE: MSMg01no453_m17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:24:46 2005
         (487 letters)



>mm_chr1_16679169_16680055
          Length = 887

 Score =  888 bits (459), Expect = 0.0
 Identities = 480/487 (98%), Gaps = 1/487 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   gttggaaatcatagagatctgcctgcctctacctcctggaattaaaggcatacgttgcca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 gttggaaatcatagagatctgcctgcctctacctcctggaattaaaggcatacgttgcca 261

                                                                       
Query: 61  cgcccagcttattttattatttttttcaaagtatcactatatatcattggctggccggga 120
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 262 cgcccagcttattttattatttttttcaaagtatcactatataacattggctggccggga 321

                                                                       
Query: 121 actcatagagattgatacatatgcctctgccttttgagttatttgcttattttttttgag 180
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 322 actcatagagattgatacatatgcctctgccttttgagttatttgcttattttttt-gag 380

                                                                       
Query: 181 acagtgccttattctgtagtacaggctgcctagaactgactatatagcttatgctagcct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acagtgccttattctgtagtacaggctgcctagaactgactatatagcttatgctagcct 440

                                                                       
Query: 241 caaactcatgctccccgttgcctcgacctctccagtgctagagttgcagatatttttcag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caaactcatgctccccgttgcctcgacctctccagtgctagagttgcagatatttttcag 500

                                                                       
Query: 301 ctgagctaaactctggtgccattggatcatagttaatgctatggccacattacaacttgt 360
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 501 ctgagctaaactctggtgccattggatcatagttaacgctatggccacattacaacttgt 560

                                                                       
Query: 361 cattaacaaatgcctgggaccagaaaacctagtacagggcttgagtgctgtttcaatctg 420
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 561 cattaacaaatgcctgggaccagaaaacctagtacagggcttgagagctgtttcaatctg 620

                                                                       
Query: 421 tttcctctttgtgctgctcgctccgttagttgtacattttctgccccttctaggaatgtc 480
           |||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 621 tttcctctttctgctgctcgctccgttagttgtccattttctgccccttctaggaatgtc 680

                  
Query: 481 tgcgtgg 487
           | |||||
Sbjct: 681 ttcgtgg 687


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 487
Length of database: 887
Length adjustment: 10
Effective length of query: 477
Effective length of database: 877
Effective search space:   418329
Effective search space used:   418329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)