Query= MSMg01no458_d16.b1 MSMg01no458_d16.b1 CHROMAT_FILE:
MSMg01no458_d16.b1 PHD_FILE: MSMg01no458_d16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:30:45 2005
(608 letters)
>mm_chr1_51257560_51258567
Length = 1008
Score = 1079 bits (558), Expect = 0.0
Identities = 594/606 (98%)
Strand = Plus / Plus
Query: 3 gaattctcttcgtgtgccctgagctctatgagtcttataagaaagctgggcggtggaaat 62
||||||||| |||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 gaattctctgcgtgggttctgagctctatgagtcttataagaaagctgggcggtggaaat 262
Query: 63 aatcaagacctacttggttccagacacatgctgactcattgacagcctgctctgtagcat 122
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 aatcaacacctacttggttccagacacatgctgactcattgacagcctgctctgtagcat 322
Query: 123 agcagtagctgggtcatgcagctatctgactcctaaccagctatataaattatataaaga 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 agcagtagctgggtcatgcagctatctgactcctaaccagctatataaattatataaaga 382
Query: 183 aatcttttacatggatcatgccaatgtataaggttaaattccttcaatttcaaaaattta 242
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 383 aatcttttacatggatcatgccaatgaataaggttaaattccttcaatttcaaaaattta 442
Query: 243 agaaagatgttagtgaaaaagttatgaaagaaagatatttaagtgcaagaagtggatgaa 302
||||||||||||||||||||||||||||||||||| | | ||||||||||||||||||||
Sbjct: 443 agaaagatgttagtgaaaaagttatgaaagaaagagagtcaagtgcaagaagtggatgaa 502
Query: 303 tgtctctaactctaccagaaatcaaatgaaggccaccaatttccttcctacagtctgctg 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 tgtctctaactctaccagaaatcaaatgaaggccaccaatttccttcctacagtctgctg 562
Query: 363 ttcttatatgacacagtcttcaaagaaatccaatccattaagcttaagctagctctcctc 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 ttcttatatgacacagtcttcaaagaaatccaatccattaagcttaagctagctctcctc 622
Query: 423 ttgttgaacaatcaggtggaagaaggtagtatcacatagtgaaaaatatagttttcaaag 482
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 623 ttgttgaacaatcaggtggaagaaggtagtgtcacatagtgaaaaatatagttttcaaag 682
Query: 483 gaaacagcaggccactagcccagccactgtgctttccttaatggactccatatttttacc 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 gaaacagcaggccactagcccagccactgtgctttccttaatggactccatatttttacc 742
Query: 543 tctgatttttcctaatgaccagtgccatggcatcttatcaagaaatcagggctcattagt 602
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||
Sbjct: 743 tctgatttttcctaatgaccagtgccatggcatcctatcaagaaatcagggctcattcgt 802
Query: 603 taatca 608
||||||
Sbjct: 803 taatca 808
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 608
Length of database: 1008
Length adjustment: 10
Effective length of query: 598
Effective length of database: 998
Effective search space: 596804
Effective search space used: 596804
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no458_d16.g1 MSMg01no458_d16.g1 CHROMAT_FILE:
MSMg01no458_d16.g1 PHD_FILE: MSMg01no458_d16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:30:45 2005
(524 letters)
>mm_chr1_51423639_51424562
Length = 924
Score = 750 bits (388), Expect = 0.0
Identities = 421/442 (95%), Gaps = 17/442 (3%)
Strand = Plus / Minus
Query: 100 tcacctcagtgcacccctcgccttgtgttcccatccttcaaaaatgtacaggctcccttt 159
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 924 tcacctcagtgcacccctcgccttgtgttcccatccttcaaaaatgtacaggctcccttt 865
Query: 160 gggaatgaggttcagaccctgaactggctgcctccctgagcactcagaaaatagaccttt 219
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 864 gggaatgaggttcagaccctgaactggctgcctccctgagcactcagaaaatagaccttt 805
Query: 220 caattttaagcttccacgtctcaa-------gttttttgttttt----------tttttt 262
|||||||||||||||||||||||| ||||||| ||||| ||||||
Sbjct: 804 caattttaagcttccacgtctcaagtgagttgttttttttttttttttttttggtttttt 745
Query: 263 tttttttttttttttttgggttccaacctgaacccaacaccaaatgtgctctgtggcatg 322
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 tttttttttttttttttggcttccaacctgaacccaacaccaaatgtgctctgtggcatg 685
Query: 323 aacctctttttcttctctctcccactttttctttccctccctttccacatcccaataccc 382
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 aacctctttttcttctctctcccactttttctttccctccctttccacatcccaataccc 625
Query: 383 acaaagcatatgaacttggagaaagccaaaggttaaaattaaaaatgtattctccttcca 442
||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||
Sbjct: 624 acaaagcatatgaacttggggaaagccaaaggttaaaattagaaatgtattctccttcca 565
Query: 443 cttaaaaaaaatgttccctaaataagtagtaatactacatatctggataaaaatttaatg 502
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 cttaaaaaaaatgttccctaaataagtagtaatactacatatctggataaaaatttaatg 505
Query: 503 gcattagagtgaggaaatgaaa 524
||||||||||||||||||||||
Sbjct: 504 gcattagagtgaggaaatgaaa 483
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 63
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 524
Length of database: 924
Length adjustment: 10
Effective length of query: 514
Effective length of database: 914
Effective search space: 469796
Effective search space used: 469796
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
