Query= MSMg01no460_a05.b1 MSMg01no460_a05.b1 CHROMAT_FILE:
MSMg01no460_a05.b1 PHD_FILE: MSMg01no460_a05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:33:08 2005
(268 letters)
>mm_chr1_31509154_31509822
Length = 669
Score = 470 bits (243), Expect = e-137
Identities = 258/263 (98%), Gaps = 1/263 (0%)
Strand = Plus / Minus
Query: 7 gaattcactgtaaaccatgcctttgttgaaactgcagaactctccttggaacagacacca 66
|||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 gaattcactggaaattatgcctttgttgaaactgcagaactctccttggaacagacacca 410
Query: 67 tgtttcttgacaggggaagccagccagggagcagagcaggcaagcaaggctggcagccag 126
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 409 tgtttcttgacaggggaagccagccagggggcagagcaggcaagcaaggctggcagccag 350
Query: 127 tgatcttattgaatattgtttgccatagagagatacaggaggctgactgccccagaggat 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 tgatcttattgaatattgtttgccatagagagatacaggaggctgactgccccagaggat 290
Query: 187 tgctaacaggcagcatatctaaaaagaaaattttctttgcagtgaaagagcaa-aaattc 245
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 289 tgctaacaggcagcatatctaaaaagaaaattttctttgcagtgaaagagcaagaaattc 230
Query: 246 tgatatctgaaaactactttttc 268
|||||||||||||||||||||||
Sbjct: 229 tgatatctgaaaactactttttc 207
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 268
Length of database: 669
Length adjustment: 9
Effective length of query: 259
Effective length of database: 660
Effective search space: 170940
Effective search space used: 170940
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no460_a05.g1 MSMg01no460_a05.g1 CHROMAT_FILE:
MSMg01no460_a05.g1 PHD_FILE: MSMg01no460_a05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:33:08 2005
(188 letters)
>mm_chr1_31318673_31319260
Length = 588
Score = 263 bits (136), Expect = 4e-75
Identities = 139/140 (99%)
Strand = Plus / Plus
Query: 1 cttctggtttccatttctagaaaacatctcagatagttcagatttcttgtagaagcagca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttctggtttccatttctagaaaacatctcagatagttcagatttcttgtagaagcagca 260
Query: 61 ctctctgcagaggagagcacacatcttgtactataggagttgaggctgatctgagctttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctctctgcagaggagagcacacatcttgtactataggagttgaggctgatctgagctttc 320
Query: 121 tcaaagatatatatatatat 140
||||| ||||||||||||||
Sbjct: 321 tcaaatatatatatatatat 340
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 188
Length of database: 588
Length adjustment: 8
Effective length of query: 180
Effective length of database: 580
Effective search space: 104400
Effective search space used: 104400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
