CCTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCCAGAGGATC
CGCGGAATTCCAACATAATTCTTTACAGAAAACGATAGGACAAATCTCAG
CTTCATATGGAAAAATAAAAATATCATGATAGTTAAAATAATTCTGAACT
GGGCAGGTGAGATGGCTCCAAGATTAAGAGCACTGGCTCTCTTCCAGAGG
TTCTGATTTCAATTCCCAGCAACCACATGGTGACTCACAACCATCTGTAA
TTGTATCTGATGCTTCTGGTGTCGGAAGTTAGCTACAGTGTAATCATACA
CTAAAATAAATAAAAACCTCTTAAAAATATTCTGAACAATAAAAAAAAAC
TGCTGCAGGTATAATGATATTTGACTATGAGTGTTCTAGTAATAAAAATA
CCCCATGGTACTGGCATAAAATCATACACATTGATCAACAAATTTGAAAT
GAATACTCAGACACAAATACACACAACTATAGACACACCTACATTTGATA
AAGAGGCCAGTATAGATTCAATTTCTTTCTTCAAAGATATGAAGGTTTTA
TCAGGCAAGTTATTCACTTGTCTACATAGAGTTTTCTGGAGAAGCTTTAT
ATTGTACAAGAATATTGTGAAGGGTATTGCTTTCCCATTTTTTTCTCAAT
CCACTTGTCATTTGTATTTGTATTCCCGTTTTGTACTGTATTTGTATTCA
CGTACTTTAAATTATATGAATTTCTCCCN

TTCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCTGGTGAGTTTCCA
GGACAGCTAAGGATATGTAGTGAGGTCCTGTCGCCCCAAGATACAGAAAA
AAGAATATAGTCTTAAAGAAGGGAACTCAGATTCTGGAAGTTAACGTATC
TAGAAAATCTTATACAAAAGTCCCACAGTTGCCGAATTTGTGAAATCTCG
AACTTCCCAAAACAGTACCTGAAATGCAAGCCAATAATTCAACAAAGAAA
AAATGTTGAGTAGATTGGACTAGCAAGAAATTTTTTATCTGCTTATTGAT
TCCATGATTGAGTTTATAAGAAGATGAAAATATAGGCAGACATATAAACA
ATATATTTAAAAATTTGAATATGAATATATCAATTACTCTTTATATTCTT
TGGTTAAGTTCTAGGCTCGGCGCCATGCCATCTGTATGGAAGAATGAGAA
GAATAGATTCAAGCTGAGTTGTAACATGCACAACTAAAACAAGGAGCTTT
ATTTACAAAAATTAAGAGAAGGATAGATATTAAATGAATTGTAACAAAAA
TGTTATATTAAATTCAATGAAATGTAGAGACAAATATAAAATAAGATTAT
ATGAATGAAATGTGATTTACTCAAAAGCTGAATATATATCTACATTCTGA
TTGGGTTTTAAAATTCTAAACTTAACAGGAAGGN

Query= MSMg01no461_c01.g1 MSMg01no461_c01.g1 CHROMAT_FILE:
MSMg01no461_c01.g1 PHD_FILE: MSMg01no461_c01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:34:36 2005
         (542 letters)



>mm_chr1_111481144_111482085
          Length = 942

 Score =  994 bits (514), Expect = 0.0
 Identities = 535/542 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   tctggtgagtttccaggacagctaaggatatgtagtgaggtcctgtcgccccaagataca 60
           |||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||
Sbjct: 201 tctggtgagtttccaggacagctaaggatatgtagtgaggtcctgttgccccaaaataca 260

                                                                       
Query: 61  gaaaaaagaatatagtcttaaagaagggaactcagattctggaagttaacgtatctagaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaaaaaagaatatagtcttaaagaagggaactcagattctggaagttaacgtatctagaa 320

                                                                       
Query: 121 aatcttatacaaaagtcccacagttgccgaatttgtgaaatctcgaacttcccaaaacag 180
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 321 aatcttatacaaaagtcccacagttgtcgaatttgtgaaatctcgaacttcccaaaacag 380

                                                                       
Query: 181 tacctgaaatgcaagccaataattcaacaaagaaaaaatgttgagtagattggactagca 240
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 381 tacctgaaatgcaagccaataattcatcaaagaaaaaatgttgagtagattggactagca 440

                                                                       
Query: 241 agaaattttttatctgcttattgattccatgattgagtttataagaagatgaaaatatag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agaaattttttatctgcttattgattccatgattgagtttataagaagatgaaaatatag 500

                                                                       
Query: 301 gcagacatataaacaatatatttaaaaatttgaatatgaatatatcaattactctttata 360
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 501 gcagacatataaacaatatatttaaaattttgaatatgaatatatcaattactctttata 560

                                                                       
Query: 361 ttctttggttaagttctaggctcggcgccatgccatctgtatggaagaatgagaagaata 420
           ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct: 561 ttctttggttaagttctaggctcagcgccatgccatctctatggaagaatgagaagaata 620

                                                                       
Query: 421 gattcaagctgagttgtaacatgcacaactaaaacaaggagctttatttacaaaaattaa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gattcaagctgagttgtaacatgcacaactaaaacaaggagctttatttacaaaaattaa 680

                                                                       
Query: 481 gagaaggatagatattaaatgaattgtaacaaaaatgttatattaaattcaatgaaatgt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gagaaggatagatattaaatgaattgtaacaaaaatgttatattaaattcaatgaaatgt 740

             
Query: 541 ag 542
           ||
Sbjct: 741 ag 742


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 542
Length of database: 942
Length adjustment: 10
Effective length of query: 532
Effective length of database: 932
Effective search space:   495824
Effective search space used:   495824
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)