Query= MSMg01no461_c08.b1 MSMg01no461_c08.b1 CHROMAT_FILE:
MSMg01no461_c08.b1 PHD_FILE: MSMg01no461_c08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:34:37 2005
(267 letters)
>mm_chr1_99964450_99965117
Length = 668
Score = 453 bits (234), Expect = e-132
Identities = 258/266 (96%), Gaps = 1/266 (0%)
Strand = Plus / Minus
Query: 3 gaattctttaatt-ttactttaatactttagtttacatagtatatgagttagggtttatt 61
||||||||||||| || || || ||||||||||||||||||||||||||||||||||||
Sbjct: 347 gaattctttaattaataattcaacactttagtttacatagtatatgagttagggtttatt 288
Query: 62 aaatggtgtgtatatatatgacagatcgtccatgtggttacaattacggttgagggactt 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 aaatggtgtgtatatatatgacagatcgtccatgtggttacaattacggttgagggactt 228
Query: 122 aacagagaggcaactcatttgcttctgtggtggtttgaatgataatggcctccattggct 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 aacagagaggcaactcatttgcttctgtggtggtttgaatgataatggcctccattggct 168
Query: 182 catatacctgaatacttagtcctctttgcaactgtttgctaaggattagggggtgtggcc 241
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 167 catatacctgaatacttagtcctcagtgcaactgtttgctaaggattagggggtgtggcc 108
Query: 242 ttgtatggaggagctgcgtcactttg 267
|||||||||||||||| |||||||||
Sbjct: 107 ttgtatggaggagctgtgtcactttg 82
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 267
Length of database: 668
Length adjustment: 9
Effective length of query: 258
Effective length of database: 659
Effective search space: 170022
Effective search space used: 170022
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no461_c08.g1 MSMg01no461_c08.g1 CHROMAT_FILE:
MSMg01no461_c08.g1 PHD_FILE: MSMg01no461_c08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:34:38 2005
(467 letters)
>mm_chr1_99830857_99831723
Length = 867
Score = 872 bits (451), Expect = 0.0
Identities = 463/467 (99%)
Strand = Plus / Plus
Query: 1 actttgtatgagcatttaatcagtgactaaggctgatgctgaacaggggactaaataatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actttgtatgagcatttaatcagtgactaaggctgatgctgaacaggggactaaataatt 260
Query: 61 acgataaccacaggatgtcagtgagcaccgttatgtgcctattgtcacctgtaaaatcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acgataaccacaggatgtcagtgagcaccgttatgtgcctattgtcacctgtaaaatcct 320
Query: 121 tacataaatacatgtggtacaggtttctactgcgagccggccaatccttaccagtaactc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tacataaatacatgtggtacaggtttctactgcgagccggccaatccttaccagtaactc 380
Query: 181 ccagtggatgagggcatgttgcatccaaacagcagcatatggtggacagtgtccatgctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccagtggatgagggcatgttgcatccaaacagcagcatatggtggacagtgtccatgctg 440
Query: 241 gccctaggcttgaagtcaactgtcaggagaaaacaatacacaaatgtgactataagctat 300
|||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 441 gcccgaggcttgaagtcaactgtcaggagaaaacaatacacaaatgtgactacaagctat 500
Query: 301 atgcgtatgtggcaatgtcagaggagaccacatctttcaacagctcgaatatctgtttaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atgcgtatgtggcaatgtcagaggagaccacatctttcaacagctcgaatatctgtttaa 560
Query: 361 aaatatgctttgatgctttcatgataaaatgccccaatatcttaaggtgagtatgagtta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aaatatgctttgatgctttcatgataaaatgccccaatatcttaaggtgagtatgagtta 620
Query: 421 ataatttgatttaggaataccgcaaactattgtgtatgaaaaaagaa 467
|||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 621 ataatttgatttaggaatacagtaaactattgtgtatgaaaaaagaa 667
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 467
Length of database: 867
Length adjustment: 10
Effective length of query: 457
Effective length of database: 857
Effective search space: 391649
Effective search space used: 391649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
