Query= MSMg01no461_o05.b1 MSMg01no461_o05.b1 CHROMAT_FILE:
MSMg01no461_o05.b1 PHD_FILE: MSMg01no461_o05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:35:40 2005
(292 letters)
>mm_chr1_129633868_129634559
Length = 692
Score = 426 bits (220), Expect = e-123
Identities = 250/260 (96%), Gaps = 2/260 (0%)
Strand = Plus / Plus
Query: 14 aatccacctgcccctgcctcctgagagcttggattaaaggcctgtgccaccaccaacagg 73
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 aatccacctgcccctgcctcctgagagcttggattaaaggcctgtgccaccaccaacagg 273
Query: 74 cttcatacatgca-tttttacagcagaccatctgaggtggaaagacaacagatttgtggg 132
||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 274 cttcatacatgcattttttaaagcagaccatctgaggtggaaagacaacagatttgtggg 333
Query: 133 aacaaagctaaattgtttctggagaatcaggactcactctctgcatttaccagtaatagg 192
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 334 aacaaagctaaattgtttctggagaatcaggactcactctctgcagttaccagtaatagg 393
Query: 193 atcttggctcatgaatccatggagggaaatgctttgggttaatctatatttctatttttt 252
||||||||||| ||||||||||||||||||||||||||||||||| || | || ||||
Sbjct: 394 atcttggctcaggaatccatggagggaaatgctttgggttaatctctagt-ctggctttt 452
Query: 253 tgcaacagtgatatggtgaa 272
||||||||||||||||||||
Sbjct: 453 tgcaacagtgatatggtgaa 472
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 692
Length adjustment: 9
Effective length of query: 283
Effective length of database: 683
Effective search space: 193289
Effective search space used: 193289
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no461_o05.g1 MSMg01no461_o05.g1 CHROMAT_FILE:
MSMg01no461_o05.g1 PHD_FILE: MSMg01no461_o05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:35:40 2005
(319 letters)
>mm_chr1_129823783_129824501
Length = 719
Score = 586 bits (303), Expect = e-172
Identities = 315/319 (98%)
Strand = Plus / Minus
Query: 1 caacttacatagtctccagcctctggtgcaggaatgttattgtctattgaagtagttcca 60
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 352 caacttacatagtctccagcctctggtgcaggaatgctattgtctattgaagtagttcca 293
Query: 61 tctaacggcttctcagagacagcatctgggaacaagaactaggggagggataatcacatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 tctaacggcttctcagagacagcatctgggaacaagaactaggggagggataatcacatt 233
Query: 121 atacttaccttctttgatgattttaacgttctttttctcatgaaagtcagttctcactat 180
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 232 atacttaccttctttgatgattttaacgttctttttctcgtgaaagtcagttctcactat 173
Query: 181 aaagctctagctaacttagaactcaatatgtagaccaggatggcaaagcactcagagatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 172 aaagctctagctaacttagaactcaatatgtagaccaggatggcaaagcactcagagatc 113
Query: 241 catctgctccacaggtactaggatgggattaaaaatataagctactacatctaactattc 300
|| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 112 cacctgctccacaggtactgggatgggattaaaaatataagctactacatctaactattc 53
Query: 301 tgttggtgtttataaccca 319
|||||||||||||||||||
Sbjct: 52 tgttggtgtttataaccca 34
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 719
Length adjustment: 9
Effective length of query: 310
Effective length of database: 710
Effective search space: 220100
Effective search space used: 220100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
