NGGATCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATCTCACCTTACCCAAGACGAATGGNAGAGAAGCACCTGAAAAAA
TGTTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTGAG
ATTCCACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGACA
GCAGATGCTGGCGAGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGG
TGGGATTGCAGGCTTGTACAACCACTCTGGAAATCAGTCTGGCAGTTCCT
CAGAAAATTGGACATATTTTTACCGGAGGGTCCAGCAATACCTCTCCTGG
GCATATATCCAGAAGGTGCCCCAACTGGTAAGAAGGACACATGCTCCACT
ATGTTCATATCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAACCCAG
ATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATCTACACAA
TGGAGTACTACTCAGCTATTAAAAAGAATGAATTTATGAAATTCCTAGCC
AAATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACACATTCACA
AAGGAACTCACACAATATGTACTCACTGATAAGTGGATATTAGCCTCAAA
CCTAGGATACCCAAGATATAAGATACAATTTGCTAAACACATGAAACTCA
AGAAGAAAGAAGACTGAAGTGTGGACACTATGCCCCTTCTTATAATN

TTTTCGATGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTTCAAGACACATGCTGGGCT
TTCAAACATATGTGTTTGTTCAATCACCCATTCATTCATTTGATCAGTGA
GGACCTACTCCAGACTAGATACTGTGTTCAGCATTAAGGTAACATGAAAG
GGACAGAACCTCCTCTCAAGGAACATGTGCGATGTGTTTCACCGTGGCTT
GTATAGGATCCCATTGAAGGAAGAGAATGGAGCACACACACTGTCTTGGA
TGGAGGTAAAGTTAGGTCATATTTTATTCATTAGTGAATCCTGAAGGGAA
AGTAAGATTTCTCTGAGCAGGAAGAGTCAGATGAAAGTTCACAAGTTCAG
TGCAATACTTTTTGGGATGTGTAGGGAACCTGATGGAGTCTATTGTGTGT
CAAAATGGAAAGCGGTGGCCATTGCAAGAGAAATTAAAGCTCTTCAGAAA
ATAATTGAAGCACAGCTTCAGGCTGAATGTCCAAAAGATGGTGAAAGAAG
ATATACCACAATACCCTAAATACCTTTAATACCTATAATAAAATTATAGG
AAAGATTGAATGATAGAAATACCCTTAGAAATATCCTCCGAGGGGTCTTT
TTGGAGCATTTGATTTCTTGAGGTCCCTTATCTTTGGTTTCTCTCCCCAA
AAGGTCCCCTTTCTTACTACCTTTTTATATTTAACTCCTCTTTTGGTAAG
GGAATAACTTTTCGACGTGTTCACCTCN

Query= MSMg01no462_h18.g1 MSMg01no462_h18.g1 CHROMAT_FILE:
MSMg01no462_h18.g1 PHD_FILE: MSMg01no462_h18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:36:31 2005
         (473 letters)



>mm_chr1_24495255_24496127
          Length = 873

 Score =  890 bits (460), Expect = 0.0
 Identities = 469/472 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   cttcaagacacatgctgggctttcaaacatatgtgtttgttcaatcacccattcattcat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 cttcaagacacatgctgggctttcaaacatatgtgtttgttcaatcacccattcattcat 613

                                                                       
Query: 61  ttgatcagtgaggacctactccagactagatactgtgttcagcattaaggtaacatgaaa 120
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 ttgatcattgaggacctactccagactagatactgtgttcagcattaaggtaacatgaaa 553

                                                                       
Query: 121 gggacagaacctcctctcaaggaacatgtgcgatgtgtttcaccgtggcttgtataggat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 gggacagaacctcctctcaaggaacatgtgcgatgtgtttcaccgtggcttgtataggat 493

                                                                       
Query: 181 cccattgaaggaagagaatggagcacacacactgtcttggatggaggtaaagttaggtca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 cccattgaaggaagagaatggagcacacacactgtcttggatggaggtaaagttaggtca 433

                                                                       
Query: 241 tattttattcattagtgaatcctgaagggaaagtaagatttctctgagcaggaagagtca 300
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 aattttattcattagtgaatcctgaagggaaagtaagatttctctgagcaggaagagtca 373

                                                                       
Query: 301 gatgaaagttcacaagttcagtgcaatactttttgggatgtgtagggaacctgatggagt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 gatgaaagttcacaagttcagtgcaatactttttgggatgtgtagggaacctgatggagt 313

                                                                       
Query: 361 ctattgtgtgtcaaaatggaaagcggtggccattgcaagagaaattaaagctcttcagaa 420
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 312 ctattgtgtgtcaaaatggaaagcggtggccattgcaagagaaataaaagctcttcagaa 253

                                                               
Query: 421 aataattgaagcacagcttcaggctgaatgtccaaaagatggtgaaagaaga 472
           ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 aataattgaagcacagcttcaggctgaatgtccaaaagatggtgaaagaaga 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 473
Length of database: 873
Length adjustment: 10
Effective length of query: 463
Effective length of database: 863
Effective search space:   399569
Effective search space used:   399569
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)