Query= MSMg01no463_b13.b1 MSMg01no463_b13.b1 CHROMAT_FILE:
MSMg01no463_b13.b1 PHD_FILE: MSMg01no463_b13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:37:21 2005
(594 letters)
>mm_chr1_155005717_155006712
Length = 996
Score = 1071 bits (554), Expect = 0.0
Identities = 585/596 (98%), Gaps = 2/596 (0%)
Strand = Plus / Minus
Query: 1 taactgaacttgttctggttcaagtcattccaatgcagcctccagggggttataggcatg 60
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 796 taactgaacttgttctggttcaagtcattccagtgcagcctccagggggttataggcatg 737
Query: 61 cgttaccacaccctattaatgggattt--aaaaaaaaataagaaagaaagaaaaagaaag 118
|||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||
Sbjct: 736 cgttaccacaccctatcaatgggatttaaaaaaaaaaataagaaagaaagaaaaagaaag 677
Query: 119 gcactgtgtgttccctaatgtcaagtcagagcaaatgtgtaaataaaaatgtttctgtga 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 gcactgtgtgttccctaatgtcaagtcagagcaaatgtgtaaataaaaatgtttctgtga 617
Query: 179 ttcacccccttctttctgtggagcaggcatcttcacgtgtcaaaatatcccgtaccgagt 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 ttcacccccttctttctgtggagcaggcatcttcacgtgtcaaaatatcccgtaccgagt 557
Query: 239 agagatttattctgcctgggtttcttgttaaaagcagtggatttgtacatccttgagtgt 298
||||||||| | ||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 556 agagatttaaacggcctgggttccttgttaaaagcagtggatttgtacatccttgagtgc 497
Query: 299 gtctggagctcccataagcagatggtcatttttttttcaataccttacaaatgcttattt 358
||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||
Sbjct: 496 gtctggagctcccataagcagatggtcatttttttttcaatgccttacaaatacttattt 437
Query: 359 ttcttctctccttctccccaccttgtgggccacaggttccctcagtgctggatgtgacaa 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 ttcttctctccttctccccaccttgtgggccacaggttccctcagtgctggatgtgacaa 377
Query: 419 ctctggacaatgcaggtgtaagccaggtgtgacaggacaaagatgtgaccgatgtcagcc 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 ctctggacaatgcaggtgtaagccaggtgtgacaggacaaagatgtgaccgatgtcagcc 317
Query: 479 aggcttccatatgctcaccgatgctggatgcacccgagaccaggggcaactgtaagcacc 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 aggcttccatatgctcaccgatgctggatgcacccgagaccaggggcaactgtaagcacc 257
Query: 539 tgcctgagtttaacaactcggggttgttttatctccatcagcccgtcattgaggga 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 tgcctgagtttaacaactcggggttgttttatctccatcagcccgtcattgaggga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 594
Length of database: 996
Length adjustment: 10
Effective length of query: 584
Effective length of database: 986
Effective search space: 575824
Effective search space used: 575824
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no463_b13.g1 MSMg01no463_b13.g1 CHROMAT_FILE:
MSMg01no463_b13.g1 PHD_FILE: MSMg01no463_b13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:37:21 2005
(317 letters)
>mm_chr1_154869989_154870705
Length = 717
Score = 553 bits (286), Expect = e-162
Identities = 310/320 (96%), Gaps = 6/320 (1%)
Strand = Plus / Plus
Query: 1 ttacttatgacacctgcgatctctagggtcatttccatctttcatctgaattctgagaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttacttatgacacctgcgatctctagggtcatttccatctttcatctgaattctgagaca 260
Query: 61 ttcccattttgatagttcttggcatacatttcattcggaggctgggagacctatctgaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttcccattttgatagttcttggcatacatttcattcggaggctgggagacctatctgaca 320
Query: 121 tccataatgagaacctctcatttggctagagatgaagccctggattcagtcccttata-- 178
||||||||||||||||||||||||||||| ||||||| | ||||||||||||| | |
Sbjct: 321 tccataatgagaacctctcatttggctagggatgaagac-tggattcagtccc--agaaa 377
Query: 179 -cacacatcaagcaagcacggagacccgtgcatgcagacctggtactaggggtgtggatc 237
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 acacacatcaagcaagcacggagacccgtgcatgcagacctggtactaggggtgtggatc 437
Query: 238 caaagctgaagctcattctcagggccagcctgggctacataagactttcagagagggagg 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 caaagctgaagctcattctcagggccagcctgggctacataagactttcagagagggagg 497
Query: 298 ggtggggggagagaggaatg 317
||||||||||||| ||||||
Sbjct: 498 ggtggggggagagtggaatg 517
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 717
Length adjustment: 9
Effective length of query: 308
Effective length of database: 708
Effective search space: 218064
Effective search space used: 218064
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
