Query= MSMg01no463_f06.b1 MSMg01no463_f06.b1 CHROMAT_FILE:
MSMg01no463_f06.b1 PHD_FILE: MSMg01no463_f06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:37:41 2005
(608 letters)
>mm_chr1_150714853_150715860
Length = 1008
Score = 1038 bits (537), Expect = 0.0
Identities = 588/605 (97%), Gaps = 2/605 (0%)
Strand = Plus / Minus
Query: 5 gaattccttgttgtacctagagttaacctgttttggtagactggttagccagttagcaca 64
||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 628 gaatttcttgttggacctagagttaacctgttttgctagactggttagccagttagcacg 569
Query: 65 cagggaccccttttctgatattgtagaattataaatgtatgttacaccacctttaaaatg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 cagggaccccttttctgatattgtagaattataaatgtatgttacaccacctttaaaatg 509
Query: 125 agtagtagggatctattgcagtacctcatgtttgagtggcaagtgctacaccaaataagc 184
|||| ||||||||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 508 agtaatagggatctattgcagtacctcacatttgagtggcaagtgctacaccaaattagc 449
Query: 185 aatcttaccagcaccctccccaaacaaaatgtttcttaaacacaagtactttaacttaat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 aatcttaccagcaccctccccaaacaaaatgtttcttaaacacaagtactttaacttaat 389
Query: 245 tgtgtattttcataaaatatttttgtggaaatttattactaaaattacaaaagtgaagtc 304
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 tgtgtattttcagaaaatatttttgtggaaatttattactaaaattacaaaagtgaagtc 329
Query: 305 ttatagattgtgtatggaattataaagcgatttgcgagtaaggaagagtaagcacggtac 364
|||||||||||||| ||||||||||||||||| | |||||||||||||||||||||||||
Sbjct: 328 ttatagattgtgtaaggaattataaagcgattcgagagtaaggaagagtaagcacggtac 269
Query: 365 aattattattggtaaaaatgcatgagtgtcactcagaatgtttatgaatatttttgtagc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 aattattattggtaaaaatgcatgagtgtcactcagaatgtttatgaatatttttgtagc 209
Query: 425 ccactttccattgctgagataaaagtcatgaccca-agcaacatcaggaggaacgcatat 483
||||||||||||||||||||||||||||||| ||| ||||||||||||||||| ||||||
Sbjct: 208 ccactttccattgctgagataaaagtcatga-ccagagcaacatcaggaggaaagcatat 150
Query: 484 tgagtatttcaggtcacagagctttgcagaaagcctaggcagcaacttacaggaagaagc 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 tgagtatttcaggtcacagagctttgcagaaagcctaggcagcaacttacaggaagaagc 90
Query: 544 tgaagtagaagctaaaaaaggattctccttactgctcagctccttatggatggtgaagct 603
|||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||
Sbjct: 89 tgaagtagaagctaaaaaaggattctccttactggtcagctccttatggatggcgaagct 30
Query: 604 tgttt 608
|||||
Sbjct: 29 tgttt 25
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 608
Length of database: 1008
Length adjustment: 10
Effective length of query: 598
Effective length of database: 998
Effective search space: 596804
Effective search space used: 596804
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no463_f06.g1 MSMg01no463_f06.g1 CHROMAT_FILE:
MSMg01no463_f06.g1 PHD_FILE: MSMg01no463_f06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:37:41 2005
(525 letters)
>mm_chr1_150584509_150585432
Length = 924
Score = 640 bits (331), Expect = 0.0
Identities = 364/375 (97%), Gaps = 1/375 (0%)
Strand = Plus / Plus
Query: 1 tcctaaaccaaggcatcaagccttcacaggaccaagggcgtctcctcccattaatgtcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcctaaaccaaggcatcaagccttcacaggaccaagggcgtctcctcccattaatgtcag 260
Query: 61 acaaggccatcctctgctacatatgcagctggagtcatgaatccttccatgtgtactttt 120
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 261 acaaggccatcctctgctacatatgcagctggagtcatggatccttccatgtgtactttc 320
Query: 121 aggttagtggtttagtgcctagaagctcttgggagtctggttggttgatattgctgttct 180
||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 321 aggttggtggtttagtgcctagaagctcttgggagtctggttggttgatattgttgttct 380
Query: 181 tcctatggtgttataaccccttcaaattgaaacccattcagttgaagggagcagatatac 240
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
Sbjct: 381 tcctatggtgttataaccccttcaaattgaaacccattcagttgaatggagcagatatcc 440
Query: 241 acacacctataaaatgtattcaattttagtcctccaaaaagagtaaggagagattgcata 300
||||||||| |||||||||||||||| | |||||||||||||||||||||||||||||||
Sbjct: 441 acacacctagaaaatgtattcaatttaa-tcctccaaaaagagtaaggagagattgcata 499
Query: 301 tttaggttaagtaaaattacaaattaattagagtctaggaatgtagatcatggtcaagag 360
|||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||
Sbjct: 500 tttaggttaagtaaaattacaaattaattaaagtctaggaatttagatcatggtcaagag 559
Query: 361 ttttgatttaatctt 375
|||||||||||||||
Sbjct: 560 ttttgatttaatctt 574
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 525
Length of database: 924
Length adjustment: 10
Effective length of query: 515
Effective length of database: 914
Effective search space: 470710
Effective search space used: 470710
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
