AACTATXXXXXXXXXXXXXXXXXXXXXXXXTATTTTCTAACAATCCGCGG
AANNCNNGCATTACTAAAAAAACCTGNACATACAGGAAAAGAAAGTGACC
ATTAGGCACAGTACACAATTACTGGCTATATATACCTGGAAGGCTCTAGT
AAACAAATAATAAAAGTACTTTCATATCTGTGTTTATTGCTCCACTACTT
ACAACATGCAAGAAATGGATCTAGCCCAGATGCCTATCAACAGATTATTA
CATTAAAATACAGAATTTCATATTACCAAAATAGAAAAAGAAATCATGTC
ATTTTCAAGAATATAACTAATTAGAAACCAATGCATTAAGCAAAATAAGC
CAGACATGCTTTATCTTCAATGTAAATTTAATTTTAACATTTGCTTGTGT
TTTTAAGTGTGTGCTTATAGGTCACAGAACTAGAAAGAAGCATGAGATTT
TACAGTAAGAAATGTTACAAAAGATGAGAAATAGTGACACTAATACGATA
CAGATAATAGACAAACATAACGAGATAGAAACTGCTAAGAAAGGTAAACC
AACTGTGTTGTGGCAGCAAAGGAAGTATACTAATGAAAGTAAAAGATCAC
ACCACTATATGGTGATGTATTAGTTATCAGTACTAAAACTTCTATATTAT
TTCCAAGAATATCCTCCACATATCTGTAAAATCTTTTTTTCATTACCTAT
TTTTCCCTCTTCATATTCCCTTTTGTTATTTCCTTTCCCCCCCCATATCC
CT

NACGATGCAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXTTCCCGCAACAATCAGATGCACAGCATCACTTTAAAGCA
TGAAATGTGAGCCATAGTGATGAAAAAGGATGGTCTCCGAAGTCACTGGA
CAGCCAGCCTAACTGAAATAGCAAGTCCCATGCCAGGGAAAAACAATGTT
TCAAAGAAATAAGTTAGAGAGTAATTCAGGAAGATATTCTACATCAACCT
CTGTCTTACTCACTCACGTGCACACAGACAAAGGTGATTTGCATTGGGAG
AAATCATGCAAGAGTGTATATTGTGGCTCTCAGCCTATAATCATTAAATG
TAAGAATGAATGTGGTGTTAAAACAGGACAGCTGGAAAAGAAGACATGAA
TAGCACTACTGCACAGATCTGGGCAAATCAGTATTGGAAAGGAAGAAAGC
AGGGGTGGGGGAAAGGCTATCCTTCTCTCAGGAGCCTGGAAATGACCCAA
CAGAGCCCATTCATTTCTGAAGCAAAACATCCCCTATTACTCCTCCAAAA
GATTTATCTTTGCAACTTGGCAGTCTCAATGGTATATACTTAAGGACACA
AACATATCACTGTCACTTCCATTGTGAGCCAGTCTGAAAATTTCAGGTAC
CCTTCAGTGAAGCCAATAGCCCGTACAATAAATGTCTCCCTTGAATCTTC
TATGGACCAAGAAGGTGTTTATTATGCCCGCCCGGAATCTTCATTTTATT
CTATTTTGG

Query= MSMg01no464_m14.g1 MSMg01no464_m14.g1 CHROMAT_FILE:
MSMg01no464_m14.g1 PHD_FILE: MSMg01no464_m14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:39:40 2005
         (542 letters)



>mm_chr1_117050718_117051662
          Length = 945

 Score =  965 bits (499), Expect = 0.0
 Identities = 530/541 (97%), Gaps = 3/541 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   cacagcatcactttaaagcatgaaatgtgagccatagtgatgaaaaaggatggtctccga 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 945 cacagcatcactttaaagcatgaaatgtgagccatagtgatgaaaaaggatggtctccga 886

                                                                       
Query: 65  agtcactggacagccagcctaactgaaatagcaagtcccatgccagggaaaaacaatgtt 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 885 agtcactggacagccagcctaactgaaatagcaagtcccatgccagggaaaaacaatgtt 826

                                                                       
Query: 125 tcaaagaaataagttagagagtaattcaggaagatattctacatcaacctctgtcttact 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 825 tcaaagaaataagttagagagtaattcaggaagatattctacatcaacctctgtcttact 766

                                                                       
Query: 185 cactcacgtgcacacagacaaaggtgatttgcattgggagaaatcatgcaagagtgtata 244
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct: 765 cactcacgtgcacacagacaaaggtgatttgcattgggagaaatcatgcaagagtgcaga 706

                                                                       
Query: 245 ttgtggctctcagcctataatcattaaatgtaagaatgaatgtggtgttaaaacaggaca 304
           | |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 705 tagtggctctcagcctataatcattaaatgtaagaatgaatgtgatgttaaaacaggaca 646

                                                                       
Query: 305 gctggaaaagaagacatgaatagcactactgcacagatctgggcaaatcagtattggaaa 364
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 645 gctggaaaagaagacatgaatagcaccactgcacagatctgggcaaatcagtattggaaa 586

                                                                       
Query: 365 ggaagaaagcaggggtg--ggggaaaggctatccttctctcaggagcctgg-aaatgacc 421
           |||||||||||||||||  ||||  |||||||||||||||||||||||||| ||||||||
Sbjct: 585 ggaagaaagcaggggtgaggggggtaggctatccttctctcaggagcctgggaaatgacc 526

                                                                       
Query: 422 caacagagcccattcatttctgaagcaaaacatcccctattactcctccaaaagatttat 481
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 525 caacagagcccattcatttctgaagcaaaacatcccctattactcctctaaaagatttat 466

                                                                       
Query: 482 ctttgcaacttggcagtctcaatggtatatacttaaggacacaaacatatcactgtcact 541
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 ctttgcaacttggcagtctcaatggtatatacttaaggacacaaacatatcactgtcact 406

            
Query: 542 t 542
           |
Sbjct: 405 t 405


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 542
Length of database: 945
Length adjustment: 10
Effective length of query: 532
Effective length of database: 935
Effective search space:   497420
Effective search space used:   497420
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)