BAC end | BAC-end 1 | BAC-end 2 |
---|
end name | MSMg01-468C17.T7 (MSMg01no468_c17.b1) | MSMg01-468C17.TJ (MSMg01no468_c17.g1) |
ACC | AG551704 | AG551705 |
length | 830 | 801 |
length of high quality (start - end) | 252 (53 - 304) | 184 (75 - 258) |
definition | CHROMAT_FILE: MSMg01no468_c17.b1 PHD_FILE: MSMg01no468_c17.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 19:44:16 2005 | CHROMAT_FILE: MSMg01no468_c17.g1 PHD_FILE: MSMg01no468_c17.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 19:44:16 2005 |
singlet/doublet | singlet | --- |
---|
BLAST hit | unique | no hit data |
---|
sequence | NCCCCCTCTATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCCTACTTCTTTACTCCCTGAACAACACTTAAATGAAAAAC
TTCCACAATGAAGTAGCAGAAAATGGTAGAGTTTTGAAAAGTTCTTCATG
CTTATTTATTTAATTTTAAGTTAAATCTGCTCATATAGAAGTCAGGGAGA
CACCCTTTGTGAACCAAAGCGTTTCCTCCAGTGCTGCATGCATGCATGTA
TGTGCGTGCATGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
TGTAATAAATTTTTTAAAAAATTATTTTTTTTTTTTAAAAAAAAAAAAAA
AAAAAAAAAAAAAAATTAAATCCCCCACCACCCAAAACAAAAAATAAACA
TTCAATTTCTTTTCTTCTTTTATCCCCCCCTTTACTTTTCTCTTTTATTT
TTTTCCTTTTTTCTTCTTTTTTCTCCCCTTTTTTTTCATTATTTTATTTA
ACACATTTTTTTTTTTTAATATTTTTTTCTCTTCCTTTATCTATTTTTTT
TCTTCTTTCTTTTATTTCTTAAATTTATTTTCCTTCTTCCCTCTTAATCT
ATCTTTATTATTTTATTCCTTTTATTCTTTCCCTATCTTTTCTCTTATTT
TCTCCTTCTATCTACTTTTTCTTCTTCTATCTCCTTTTTTATACCTTTCT
TACTATTTTATTTTTACAATATTTTTCCTCACACAACCTCTCACACACTT
CCTACTTCCCTCCTCTCTTACTTTCCCCCTACTTCACTCCCCCTTATCCT
CTTCATATTTTTCGATTTCTCTCTCTCCTT
| TCTCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXTTCAGGAATTCTCTATTGTGATTCAAACAAATGT
TGTTAAATTTATTATGATGCATTTCTAGATTTTCTTTGATGGTATAAGTA
AATATATACTTTTAACTTCTTAACACACACACACACACACATATGTGTGT
GTGTGTGTGTGTGTATATATATATATATATATATATATATATACACACAC
ACACACACATATATGTGTGTGTGTGTGTGTGTGTGAGAGAGATATATATA
TATATATATACATAGAGACACAAAATATTTTTTTTTATATATATATATAT
ATATGTGTGTGTGTATATATATATATATGTGTGTGTGTGTATATATAGAT
ATATATATATATATAGAGAGGGGCGCGCGGGCGAGAGACAGACCTTTTTG
CGCGTGTGTGTGCGAGAGATATATATATATATATATATATATATATCTCC
TTCCTCCTCTATTCTTTATTCTTATCACCTTTCCTTTTTTTTAATTTTTC
TTCTCGATTCATTCTAACTCTACATCCTCTCTTCGTCTTTTTTTTTCTCT
TTTTCTCTCCCCTCTTTCTTCTTCTTTTATATATATCCTTTTCTATACTT
ATTTACCTCCTCCCTTCACTCCTTTTTTTTCTTTTCTTTTTATCACAACG
ATTATATTCGACCTATCTTCATCTATTCTCCCTTTCCCTACATCTTTTTT
TAGCTTTTGTATTCACCCCACCTTCTACATTCATGCCTTGATGCTTATCC
G
|
quality values | Open.Hide. 0 3 7 7 8 8 8 11 11 8 8 8 8 8 21 12 11 10 12 12 22 26 37 37 31 31 41 37 37 41 47 30 28 26 22 22 23 25 12 9 9 10 10 8 8 10 10 10 11 11
16 16 15 30 31 28 28 28 28 28 31 59 59 47 33 21 8 6 6 7 6 8 8 10 12 28 28 23 25 21 23 23 37 37 37 38 38 42 57 50 50 50 50 53 53 57 59 57 57 53
53 47 40 40 40 42 42 42 47 57 68 68 68 68 54 54 57 54 54 54 50 50 48 46 44 39 43 37 32 28 30 30 31 44 48 57 68 68 51 51 50 50 50 51 68 68 68 68 68 68
68 68 68 68 68 68 68 68 68 68 68 51 51 50 50 50 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 59 59 68 57 68 68 68 68 68 68 68 68 68 68 68 68 50 50 50
57 57 54 57 57 59 59 68 59 59 57 57 57 57 57 54 57 57 59 59 68 68 68 68 59 59 57 57 57 57 57 57 59 68 68 68 59 59 59 57 57 57 57 57 57 54 54 54 54 54
57 48 48 48 48 48 48 48 48 47 47 43 43 43 43 47 47 48 48 48 48 46 46 46 46 43 46 46 48 48 48 48 48 48 48 48 48 48 48 48 48 48 48 48 48 43 47 34 39 26
19 14 10 8 6 6 8 10 10 8 10 10 11 15 10 8 7 8 8 8 6 6 6 6 8 8 16 25 32 32 28 27 26 15 15 10 11 11 17 8 8 7 7 8 9 9 9 8 8 8
8 8 8 11 9 9 9 9 9 9 9 10 9 9 9 9 10 7 6 6 6 8 8 10 10 6 6 6 8 8 11 11 11 12 11 8 6 6 6 8 8 8 8 6 6 8 8 8 8 8
8 10 8 8 8 8 11 9 8 8 8 8 8 8 8 8 8 10 10 10 9 9 9 10 10 11 12 11 8 8 8 8 8 8 10 11 11 17 20 13 13 11 10 8 8 8 8 8 8 8
6 8 8 8 8 10 8 10 9 9 8 8 6 6 8 6 6 8 8 10 15 10 10 10 10 10 9 10 9 12 13 23 23 13 10 10 10 10 9 10 8 9 11 10 8 8 8 8 8 11
8 8 8 8 8 8 10 11 15 18 18 18 16 16 10 8 8 8 6 7 8 8 11 11 12 14 9 8 10 9 8 8 11 11 12 10 8 8 10 9 10 17 11 15 23 26 34 23 15 10
8 8 12 14 13 11 8 8 7 7 10 15 9 10 10 13 13 13 13 8 8 8 8 10 12 8 10 10 10 10 10 10 9 8 8 8 8 8 8 8 8 12 13 15 16 10 10 8 8 8
8 8 8 8 10 10 8 8 8 8 8 8 8 8 8 8 8 9 8 8 11 10 10 8 8 8 8 12 10 8 8 8 10 8 12 12 12 18 24 24 14 14 14 10 13 6 6 8 10 11
8 8 8 8 10 10 9 12 9 9 11 8 8 8 8 10 8 8 11 8 8 8 10 6 6 8 10 6 9 11 11 13 8 9 9 10 10 15 11 6 6 6 8 9 13 10 10 9 10 8
8 8 10 10 6 6 10 10 6 6 6 10 7 16 9 9 7 7 7 8 10 10 10 13 11 8 8 9 12 9 8 8 8 8 10 10 10 10 11 11 11 11 11 6 10 10 10 8 8 9
12 12 10 10 8 8 10 8 11 11 10 10 6 6 8 8 8 10 6 6 8 8 9 10 10 14 11 11 10 10 8 8 8 8 8 8 8 10 8 8 8 8 8 8 8 8 8 8 8 6
6 8 8 10 10 10 10 9 13 12 13 8 8 8 8 10 11 11 9 9 9 9 8 11 12 10 10 9 9 9 | Open.Hide. 6 6 6 6 7 11 15 10 10 9 9 12 9 9 9 15 17 37 32 29 31 39 37 37 37 37 35 29 29 32 37 37 25 25 9 9 6 8 8 6 6 6 12 14 15 21 21 22 29 33
37 47 47 47 47 44 50 50 50 59 33 29 11 10 11 9 9 9 9 9 9 10 10 16 16 21 24 39 43 48 48 48 57 57 53 53 53 47 47 47 42 42 43 43 48 42 47 53 53 68
68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 48 44 44 44 37 37 37 44 46 57 57 57 57 68 57 57 57 57 57 57 57 57 68 68 68 68 68 68
68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 57 57 59 68 57 57 57 57 57 59 59 59 68 68 68 68 68 68 68
68 68 68 68 68 68 68 68 68 68 59 59 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 57 57 43 43 28 28 20 20 17 17 17 20 20 36 36 43
43 46 42 42 27 27 17 17 17 12 12 12 12 12 16 18 15 15 15 15 17 26 16 22 17 17 12 19 12 12 13 15 13 14 14 18 15 19 18 15 15 13 13 13 15 15 34 34 47 43
43 43 43 47 47 40 40 24 24 20 20 15 23 15 20 18 23 12 12 12 12 12 15 15 14 18 14 12 15 18 22 22 22 20 21 14 16 16 19 19 25 28 23 23 22 22 23 23 20 25
28 30 30 23 28 23 28 28 36 19 19 13 13 13 13 13 25 24 37 39 30 30 17 12 12 12 11 11 11 9 9 9 9 11 12 12 12 12 12 14 12 15 11 11 11 12 11 12 11 12
12 18 18 41 41 44 28 28 20 31 28 18 15 15 12 11 11 12 11 11 11 11 12 12 11 11 11 11 15 21 13 13 13 13 13 13 15 12 12 12 12 12 16 10 8 8 8 8 8 11
18 12 12 12 18 15 15 9 8 8 8 8 8 11 12 18 12 12 14 28 28 39 33 36 20 19 27 27 36 42 43 48 48 37 37 37 29 21 16 10 10 17 23 18 18 11 11 11 10 12
12 11 9 9 8 8 8 8 8 8 10 10 8 8 8 8 8 8 8 10 8 10 8 10 8 6 6 8 8 10 8 8 8 8 8 10 10 9 9 10 16 12 9 9 9 8 10 10 10 8
8 8 8 8 6 6 8 8 8 6 6 8 8 10 8 8 8 8 8 8 8 8 8 13 8 8 9 9 8 8 13 9 8 8 8 8 8 8 10 10 10 10 10 8 6 6 8 8 8 8
12 12 12 7 6 8 8 11 12 12 11 9 9 11 16 11 11 11 13 10 10 9 9 13 13 14 16 10 8 8 8 8 8 8 8 11 11 11 10 12 10 10 10 8 8 9 10 10 10 10
12 12 19 9 9 8 12 12 11 9 9 10 10 8 8 8 8 8 8 10 10 10 11 13 13 17 17 10 10 10 17 17 22 16 11 11 9 9 8 10 8 8 8 8 8 10 8 9 9 9
9 10 8 8 8 8 8 16 9 9 8 8 8 6 6 6 10 10 19 9 9 8 8 8 8 8 8 6 6 8 8 11 8 8 6 6 8 8 8 8 8 6 7 10 8 9 9 9 8 8
6 6 8 8 10 10 8 8 6 6 8 8 8 8 8 8 10 8 8 8 8 10 9 7 7 6 8 8 8 8 8 10 10 10 10 11 10 10 7 6 8 8 9 9 9 8 8 8 8 7
7 |