Query= MSMg01no469_k01.b1 MSMg01no469_k01.b1 CHROMAT_FILE:
MSMg01no469_k01.b1 PHD_FILE: MSMg01no469_k01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:46:16 2005
(162 letters)
>mm_chr1_156800665_156801226
Length = 562
Score = 257 bits (133), Expect = 2e-73
Identities = 155/165 (93%), Gaps = 6/165 (3%)
Strand = Plus / Plus
Query: 1 aacgctacgggctctcccatccaacccatagacgctaagagtt---tagccccgacttca 57
||||||||| |||||||||||||||||||||||||||||||| |||| |||||||
Sbjct: 201 aacgctacgtgctctcccatccaacccatagacgctaagagtcgagtagc---gacttca 257
Query: 58 gagactagaggaggagatgtaaggcaaagaatatacattttcaactatgagatgaacaca 117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 gagactagaggaggagatgtaaggcaaagaatatacattttcaactatgagatgaacaca 317
Query: 118 tcccaagggggttgtgtatagcatggggagggagggatatgttga 162
|||||||||||||||| ||||||||||||||| ||||||||||||
Sbjct: 318 tcccaagggggttgtgaatagcatggggagggggggatatgttga 362
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 162
Length of database: 562
Length adjustment: 8
Effective length of query: 154
Effective length of database: 554
Effective search space: 85316
Effective search space used: 85316
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no469_k01.g1 MSMg01no469_k01.g1 CHROMAT_FILE:
MSMg01no469_k01.g1 PHD_FILE: MSMg01no469_k01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:46:16 2005
(310 letters)
>mm_chr1_156968971_156969680
Length = 710
Score = 557 bits (288), Expect = e-163
Identities = 303/308 (98%)
Strand = Plus / Minus
Query: 1 ttccaggaatactctgagaagaaacatgctccaagaggtgacgattctggcaaatttgaa 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 508 ttccaggaatactctgagaagaaacatgctccaagaggtgacgattctgggaaatttgaa 449
Query: 61 ggagctgtaataacaaaaacacaatcatttgaagtcgcatccggagctgaaactcaacct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 ggagctgtaataacaaaaacacaatcatttgaagtcgcatccggagctgaaactcaacct 389
Query: 121 tgtcctgtgctttaaaatacctaagcacacgctctgcccattactcacaagacagctatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 tgtcctgtgctttaaaatacctaagcacacgctctgcccattactcacaagacagctatg 329
Query: 181 gatacataagctgtgtattacccacaacaggaagttgtcagagcagaccgagccccagag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 gatacataagctgtgtattacccacaacaggaagttgtcagagcagaccgagccccagag 269
Query: 241 gctgagtattatttttgaatattgccctactcaaaacaaaaacaaacggaattaatcatt 300
|||||||| || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 gctgagtactagggttgaatattgccctactcaaaacaaaaacaaacggaattaatcatt 209
Query: 301 gatccttg 308
||||||||
Sbjct: 208 gatccttg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 310
Length of database: 710
Length adjustment: 9
Effective length of query: 301
Effective length of database: 701
Effective search space: 211001
Effective search space used: 211001
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
