CCTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAGACCCAGCGCG
CGGAATCAGNAAGAATTTCACCTACCCCGCAACATTCAAATTTACTTATA
GTAGAGATGGGCGAAACTAATTAGGCATTACAAAGAACAGAGCTAGAACA
GCTCAGGGATAGTCTGCAGAGTGATTACTTTGGACAGTAGCCAGTCTTAC
CCAAACAAGGGAATACACAATGGCTTACCTAATAAGTGTGTTTTACCTTG
TAAGAGTTATGGAATCCCACTGAGACAGGAATCTTCACTACAGCCAGGTA
TAGCAGGCTACCTTGCATATTAGAATTTTTTTTGGTGAATTCTTCTGACA
AATGGATATTCTCCACTGATACTTTACAGAACAGCCAAGTTATGCTCATG
CACGTATTTACCAAGGCCTAGCAAATAGGGGGCTTGTAGTGCTACATTAT
TCATGAGAAGGCCTGCTAGAGCAGAACCTCCTGGTGCTAGCTTCCATGAC
GTTCCCAGGACCAGTTCAACTTCCGCCTAGGCTGTGACACCTCTTACCTA
CCTGACTCCACCCTCCCCCTGCTCTTTCTTTACCGTCCTCACTACCTGGC
TCTCTGTTAGCCCTCTCTGAACTTCTTTCTTTTGCCTCCCCTCCTCACCC
TCCCTCCCGTCCTTCCCCCCCGCCCTGCCTTTCCCCCCCATTCTTTCTCC
TTTCTCCCCCCCCCACTTACTCTCCGTCCCCCCCCCTCTCTCCCCCCCCC
CTTTTCTCCCCCCCG

NCCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXAATAAAGTATGCAATGGTTCAC
AGTTATTCTGTAACCCGTGTATCCTAATTAATATGACCCTACGTAGGAAC
CTCAATGCAGCAGACATTGACAAGTGGCACTCAAATTCCAGGGACCCATG
AAAAGGAAGATGTCAGGAGGGTGAGAATCTTTGGTAAGGAAACCTTATTA
AAAACTGTGTTACAAGGTTATTTATCAAAAACGTTTTATAGGGAAATGGG
ACAAGGTAAATTTATTCATTATATTTCATTTTTGCAGCATTTGCTTAAAA
CTCATTGCGCTTGAGTTAACACCTTCCATCCAAAAATGTTTATCTGTTTG
TCTATGTGTTTGTGTGTAGGTATATATGTATATATGTAAACATGCATGAA
TATTTGTGGAGTTAATTGTGACAGAAGGCCGGGTCCAGCCAGAGTGCGAG
TGTATGAATATGTATATGTGCCTGTAAATATTTGCCTGTATTCAGCATAT
TAATTCTTTTTTTTGCTCAGAGGAGTCACCCCCCCAAATCCTTTCACTGA
ATTTCCCGCTGTTAAAGTACTTATCCGCCCCAAATTACCGTTTAACTTAG
CATTTTCCCTCAACCGGTTTTATCACAGAACCATTGTTTTCCCCAGCGCC
CTAATTATACACATAAGTTATTTTTTATGGTTCCATGACTTTATTATCTT
TTCCCCCTTTCATATCCCCATCTTTA

Query= MSMg01no470_j06.g1 MSMg01no470_j06.g1 CHROMAT_FILE:
MSMg01no470_j06.g1 PHD_FILE: MSMg01no470_j06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:47:32 2005
         (447 letters)



>mm_chr1_114158028_114158874
          Length = 847

 Score =  750 bits (388), Expect = 0.0
 Identities = 433/448 (96%), Gaps = 2/448 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   aataaagtatgcaatggttcacagttattctgtaacccgtgtatcctaattaatatgacc 60
           ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct: 201 aataaagtatgcaatggttcacaattattctgtaacccatgtatcctaattaatatgacc 260

                                                                       
Query: 61  ctacgtaggaacctcaatgcagcagacattgacaagtggcactcaaattccaggga-ccc 119
           |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||
Sbjct: 261 ctacgtaggaacctcaatgcagcagacattcacaagtggcactcaaattccagggatccc 320

                                                                       
Query: 120 atgaaaaggaagatgtcaggagggtgagaatctttggtaaggaaaccttattaaaaactg 179
            ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 321 -tgaaaaggaagatgtcaggagggtgagaatctttggtaaagaaaccttattaaaaactg 379

                                                                       
Query: 180 tgttacaaggttatttatcaaaaacgttttatagggaaatgggacaaggtaaatttattc 239
           |||| |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 380 tgttccaaggttatttatcaaaaacgttttatagggaaacgggacaaagtaaatttattc 439

                                                                       
Query: 240 attatatttcatttttgcagcatttgcttaaaactcattgcgcttgagttaacaccttcc 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 attatatttcatttttgcagcatttgcttaaaactcattgcgcttgagttaacaccttcc 499

                                                                       
Query: 300 atccaaaaatgtttatctgtttgtctatgtgtttgtgtgtaggtatatatgtatatatgt 359
           ||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 500 atccaaatatgtttatctgtttgtctatatgtttgtgtgtaggtatatatgtatatatgt 559

                                                                       
Query: 360 aaacatgcatgaatatttgtggagttaattgtgacagaaggccgggtccagccagagtgc 419
           ||||||||||||||||||||||||||||||||||||| |||||||| |||| ||||||| 
Sbjct: 560 aaacatgcatgaatatttgtggagttaattgtgacagtaggccgggcccagtcagagtgt 619

                                       
Query: 420 gagtgtatgaatatgtatatgtgcctgt 447
           ||||||||||||||||||||||||||||
Sbjct: 620 gagtgtatgaatatgtatatgtgcctgt 647


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 447
Length of database: 847
Length adjustment: 10
Effective length of query: 437
Effective length of database: 837
Effective search space:   365769
Effective search space used:   365769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)