Query= MSMg01no473_c21.b1 MSMg01no473_c21.b1 CHROMAT_FILE:
MSMg01no473_c21.b1 PHD_FILE: MSMg01no473_c21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:51:08 2005
(507 letters)
>mm_chr1_65366032_65366938
Length = 907
Score = 785 bits (406), Expect = 0.0
Identities = 462/496 (93%), Gaps = 28/496 (5%)
Strand = Plus / Minus
Query: 6 gaattccatgctgacttactttacttcaccatttgtaagcgctggtttcttagatacctc 65
||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 gaattccatgctgacctaatttacttcaccatttgtaagcgctggtttcttagatacctc 436
Query: 66 acttctttctttctgcacaccagtgatatctgactgtattcaaaggctgtgaactgatgg 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 acttctttctttctgcacaccagtgatatctgactgtattcaaaggctgtgaactgatgg 376
Query: 126 tttagagcttaaagttat-cataacaattacttctctgcaactacgtctggaacagtgtt 184
|||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 tttagagcttaaagtt-tccataacaattacttctctgcaactacgtctggaacagtgtt 317
Query: 185 ggaagcatcacggagaagcatgcccaaaacagctcaacagcccaaacaacagccctcagt 244
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 ggaagcatcacggagtagcatgcccaaaacagctcaacagcccaaacaacagccctcagt 257
Query: 245 tcatttgaacacaatctaacaatttcaagttgtcagccttctacaaacagcctctctgtc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 tcatttgaacacaatctaacaatttcaagttgtcagccttctacaaacagcctctctgtc 197
Query: 305 tctctcttcctctcttcttctctctcttcctctctctctcttcctctc-----------t 353
|||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 196 tctctcttcctctcttcttctctctcttcctctctctctcttcctctcttctttcttctt 137
Query: 354 ctctttcttcc-------------cccccctctctcctctgtgtgtgtatctgtgtgcat 400
|||| |||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 136 ctctctcttcctctctctttctttcccccctctctcctctgtgtgtgtatctgtgtgcat 77
Query: 401 --gagagagctgtaatatataaaatcttatgtatcatataactgaaagtatatattagct 458
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 76 gagagagagctgtaatatataatatcttatgtatcatataactgaaagtatatattagct 17
Query: 459 taatatgaacgtagat 474
||||||||| ||||||
Sbjct: 16 taatatgaatgtagat 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 507
Length of database: 907
Length adjustment: 10
Effective length of query: 497
Effective length of database: 897
Effective search space: 445809
Effective search space used: 445809
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no473_c21.g1 MSMg01no473_c21.g1 CHROMAT_FILE:
MSMg01no473_c21.g1 PHD_FILE: MSMg01no473_c21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:51:08 2005
(437 letters)
>mm_chr1_65296703_65297539
Length = 837
Score = 845 bits (437), Expect = 0.0
Identities = 437/437 (100%)
Strand = Plus / Plus
Query: 1 caataacataaataatgcctgcttttagttatgatacattgatggtcacatgtgaattga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caataacataaataatgcctgcttttagttatgatacattgatggtcacatgtgaattga 260
Query: 61 tagaatatttaaacttataaagtaaccgtgaagggtttttgttcatgaataaataattgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tagaatatttaaacttataaagtaaccgtgaagggtttttgttcatgaataaataattgt 320
Query: 121 accttaagtaagaatgaaaaaaattcagagagaggaaagagaaatgtttgtattatagaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 accttaagtaagaatgaaaaaaattcagagagaggaaagagaaatgtttgtattatagaa 380
Query: 181 cttacaaagttgatccacaaaagctggtttttgaaaccaaaagtctacattttgattata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cttacaaagttgatccacaaaagctggtttttgaaaccaaaagtctacattttgattata 440
Query: 241 agcatgtacaatttaggtaggtttccctttgcatagtgttataaaagagtcagccgttta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agcatgtacaatttaggtaggtttccctttgcatagtgttataaaagagtcagccgttta 500
Query: 301 tcttactgtttgtagttctaccactgagttatactaccagaccaaccttttgtctcatta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tcttactgtttgtagttctaccactgagttatactaccagaccaaccttttgtctcatta 560
Query: 361 gtgtgttcttcttgtaaatgtcttaaataaatttatagagacaaacacattttataatgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gtgtgttcttcttgtaaatgtcttaaataaatttatagagacaaacacattttataatgt 620
Query: 421 tgtaatatttctagtga 437
|||||||||||||||||
Sbjct: 621 tgtaatatttctagtga 637
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 437
Length of database: 837
Length adjustment: 9
Effective length of query: 428
Effective length of database: 828
Effective search space: 354384
Effective search space used: 354384
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
