Query= MSMg01no473_i16.b1 MSMg01no473_i16.b1 CHROMAT_FILE:
MSMg01no473_i16.b1 PHD_FILE: MSMg01no473_i16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:51:39 2005
(551 letters)
>mm_chr1_125361732_125362681
Length = 950
Score = 930 bits (481), Expect = 0.0
Identities = 514/533 (96%), Gaps = 17/533 (3%)
Strand = Plus / Minus
Query: 1 taaatggttgcttgctacctgctaattcagattctgcaagaaggcaacagaaatggactc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 taaatggttgcttgctacctgctaattcagattctgcaagaaggcaacagaaatggactc 468
Query: 61 agagccattgggaagtgttttgggacttctccatgggtggtatgagaagatgtctgctta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 agagccattgggaagtgttttgggacttctccatgggtggtatgagaagatgtctgctta 408
Query: 121 ccccatatagagccaagaactgagcaaagtgagaattctaccaaagttcagcttggagaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 ccccatatagagccaagaactgagcaaagtgagaattctaccaaagttcagcttggagaa 348
Query: 181 gctatacatttattgggtctgtttgtagacatttgaatgaaaggtttcgtatagaacata 240
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 gcaatacatttattgggtctgtttgtagacatttgaatgaaaggtttcgtatagaacata 288
Query: 241 gataaat--attttttt---agctaaatcacagaaaagctcaccctagcgtgagtaatga 295
||||||| | | |||||||||||||||||||||||||||| |||||||||||
Sbjct: 287 gataaataga------tgagagctaaatcacagaaaagctcaccctagggtgagtaatga 234
Query: 296 gtcaggaaagcaacttccctcattttttaaaaaattggatattttctttatttacatttc 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 gtcaggaaagcaacttccctcattttttaaaaaattggatattttctttatttacatttc 174
Query: 356 aaatgttatcccctttcctggtcccaccctaaaagcccctcccccatactccctgcttct 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 aaatgttatcccctttcctggtcccaccctaaaagcccctcccccatactccctgcttct 114
Query: 416 gcctcctggagggattccccctccacccccctcca-----cccccc-cacacacactcac 469
||||||||||||||||||||||||||||||||||| |||||| |||||||||||||
Sbjct: 113 gcctcctggagggattccccctccacccccctccaaagccccccccacacacacactcac 54
Query: 470 tcctgcctcttcaccctcccattaccctagactggggcatcaagccttcacaa 522
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53 tcctgcctcttcaccctcccattaccctagactggggcatcaagccttcacaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 551
Length of database: 950
Length adjustment: 10
Effective length of query: 541
Effective length of database: 940
Effective search space: 508540
Effective search space used: 508540
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no473_i16.g1 MSMg01no473_i16.g1 CHROMAT_FILE:
MSMg01no473_i16.g1 PHD_FILE: MSMg01no473_i16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:51:40 2005
(477 letters)
>mm_chr1_125183129_125184005
Length = 877
Score = 922 bits (477), Expect = 0.0
Identities = 477/477 (100%)
Strand = Plus / Plus
Query: 1 tttaattaaaagatgaacaaaattaaaaaggaagcaggggagaaggagagttgcttcact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttaattaaaagatgaacaaaattaaaaaggaagcaggggagaaggagagttgcttcact 260
Query: 61 cactttttaggtagaacaagctaataaaatataagcagtgttttgtgcaagacaatagaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cactttttaggtagaacaagctaataaaatataagcagtgttttgtgcaagacaatagaa 320
Query: 121 taaatacttattagtctatgcttggataaacaactgaacagagagacttagataaatgga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taaatacttattagtctatgcttggataaacaactgaacagagagacttagataaatgga 380
Query: 181 tacttagcagataaatagaccaatgataaacattgcttgtgccagaaatttaaaacattt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tacttagcagataaatagaccaatgataaacattgcttgtgccagaaatttaaaacattt 440
Query: 241 caggtagataaattgttgttaagggccttagatccattactttttgtatctctgagacag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caggtagataaattgttgttaagggccttagatccattactttttgtatctctgagacag 500
Query: 301 agtatgtgtcagacacagctcaaaggaggagagatttgttctgcacatagttcagaggaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agtatgtgtcagacacagctcaaaggaggagagatttgttctgcacatagttcagaggaa 560
Query: 361 tctgtgttccaaggtggaggcaaggcatgctgggtggctgggtctatagtaatggaagcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tctgtgttccaaggtggaggcaaggcatgctgggtggctgggtctatagtaatggaagcc 620
Query: 421 tgtgtggtgtgacctgtaagtggatgctggagagatctggttagagggggagatagt 477
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tgtgtggtgtgacctgtaagtggatgctggagagatctggttagagggggagatagt 677
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 477
Length of database: 877
Length adjustment: 10
Effective length of query: 467
Effective length of database: 867
Effective search space: 404889
Effective search space used: 404889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
