MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-473O11
Chromosome	1 (Build37)
Map Location	145,565,107 - 145,565,680
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC545369, Cdc73, B3galt2, LOC623138
Downstream gene	Glrx2, Trove2, Uchl5, Rgs2, Rgs13, Rbm6-ps2, Rgs1, EG639456, Rgs21
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC545369 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:545369
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1986 ESTs, 7 Proteins pseudo : _no_value

name	Cdc73 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:214498 MGI:2384876
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	B3galt2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:26878 MGI:1349461
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC623138 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:623138
definition	note : heterogeneous nuclear ribonucleoprotein A3 pseudogene pseudo : _no_value

name	Glrx2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69367 MGI:1916617
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 4 mRNAs

name	Trove2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20822 MGI:106652
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Uchl5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56207 MGI:1914848
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rgs2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19735 MGI:1098271
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rgs13 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:246709 MGI:2180585
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rbm6-ps2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:108213 MGI:1889581
definition	note : RNA binding motif protein 6, pseudogene 2 pseudo : _no_value

name	Rgs1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:50778 MGI:1354694
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG639456 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:639456 MGI:3648608
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins pseudo : _no_value

name	Rgs21 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:624910 MGI:3645243
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 39 Proteins

name	Cdc73 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22122444 GeneID:214498 MGI:2384876
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Vcell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) transcript_id : NM_145991.1

name	B3galt2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801472 GeneID:26878 MGI:1349461
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2 transcript_id : NM_020025.3

name	Glrx2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84370331 GeneID:69367 MGI:1916617
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glutaredoxin 2 (thioltransferase) transcript_id : NM_001038593.1

name	Glrx2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84370339 GeneID:69367 MGI:1916617
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glutaredoxin 2 (thioltransferase) transcript_id : NM_001038592.1

name	Glrx2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84370329 GeneID:69367 MGI:1916617
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glutaredoxin 2 (thioltransferase) transcript_id : NM_023505.2

name	Glrx2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84370334 GeneID:69367 MGI:1916617
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glutaredoxin 2 (thioltransferase) transcript_id : NM_001038594.1

name	Trove2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:134133269 GeneID:20822 MGI:106652
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : TROVE domain family, member 2 transcript_id : NM_013835.2

name	Uchl5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:9625046 GeneID:56207 MGI:1914848
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ubiquitin carboxyl-terminal esterase L5 transcript_id : NM_019562.1

name	Rgs2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802972 GeneID:19735 MGI:1098271
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : regulator of G-protein signaling 2 transcript_id : NM_009061.3

name	Rgs13 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142386208 GeneID:246709 MGI:2180585
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : regulator of G-protein signaling 13 transcript_id : NM_153171.3

name	Rgs1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:7657511 GeneID:50778 MGI:1354694
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : regulator of G-protein signaling 1 transcript_id : NM_015811.1

name	Rgs21 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149234325 GeneID:624910 MGI:3645243
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 39 Proteins product : regulator of G-protein signalling 21 transcript_id : XM_889451.3

name	Cdc73 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22122445 CCDS:CCDS15341.1 GeneID:214498 MGI:2384876
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0045786 - negative regulation of progression through cell cycle [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : hyperparathyroidism 2 homolog protein_id : NP_666103.1

name	B3galt2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31542173 CCDS:CCDS15342.1 GeneID:26878 MGI:1349461
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008378 - galactosyltransferase activity [Evidence IEA]; GO:0030145 - manganese ion binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0016757 - transferase activity, transferring glycosyl groups [Evidence IEA]; GO:0008499 - UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity [Evidence IDA] GO_process : GO:0009312 - oligosaccharide biosynthesis [Evidence IDA]; GO:0006486 - protein amino acid glycosylation [Evidence IEA] codon_start : 1 exception : mismatches in translation product : UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2 protein_id : NP_064409.2

name	Glrx2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84370340 CCDS:CCDS15343.1 GeneID:69367 MGI:1916617
definition	GO_component : GO:0005739 - mitochondrion [Evidence ISS] [Evidence IEA]; GO:0005634 - nucleus [Evidence ISS] [Evidence IEA] GO_function : GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0008794 - arsenate reductase (glutaredoxin) activity [Evidence ISS]; GO:0009055 - electron carrier activity [Evidence IEA]; GO:0009053 - electron donor activity [Evidence ISS]; GO:0015038 - glutathione disulfide oxidoreductase activity [Evidence ISS]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0015035 - protein disulfide oxidoreductase activity [Evidence IEA]; GO:0030508 - thiol-disulfide exchange intermediate activity [Evidence ISS]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006915 - apoptosis [Evidence ISS]; GO:0030154 - cell differentiation [Evidence ISS]; GO:0045454 - cell redox homeostasis [Evidence IEA]; GO:0042262 - DNA protection [Evidence ISS]; GO:0006749 - glutathione metabolism [Evidence ISS]; GO:0006467 - protein thiol-disulfide exchange [Evidence ISS]; GO:0006980 - redox signal response [Evidence ISS]; GO:0030503 - regulation of cell redox homeostasis [Evidence ISS]; GO:0009966 - regulation of signal transduction [Evidence ISS]; GO:0045449 - regulation of transcription [Evidence ISS]; GO:0042542 - response to hydrogen peroxide [Evidence ISS]; GO:0010033 - response to organic substance [Evidence ISS]; GO:0009268 - response to pH [Evidence ISS]; GO:0009266 - response to temperature stimulus [Evidence ISS]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : isoform a is encoded by transcript variant 1 product : glutaredoxin 2 isoform a protein_id : NP_001033681.1

name	Glrx2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84370332 CCDS:CCDS15344.1 GeneID:69367 MGI:1916617
definition	GO_component : GO:0005739 - mitochondrion [Evidence ISS] [Evidence IEA]; GO:0005634 - nucleus [Evidence ISS] [Evidence IEA] GO_function : GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0008794 - arsenate reductase (glutaredoxin) activity [Evidence ISS]; GO:0009055 - electron carrier activity [Evidence IEA]; GO:0009053 - electron donor activity [Evidence ISS]; GO:0015038 - glutathione disulfide oxidoreductase activity [Evidence ISS]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0015035 - protein disulfide oxidoreductase activity [Evidence IEA]; GO:0030508 - thiol-disulfide exchange intermediate activity [Evidence ISS]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006915 - apoptosis [Evidence ISS]; GO:0030154 - cell differentiation [Evidence ISS]; GO:0045454 - cell redox homeostasis [Evidence IEA]; GO:0042262 - DNA protection [Evidence ISS]; GO:0006749 - glutathione metabolism [Evidence ISS]; GO:0006467 - protein thiol-disulfide exchange [Evidence ISS]; GO:0006980 - redox signal response [Evidence ISS]; GO:0030503 - regulation of cell redox homeostasis [Evidence ISS]; GO:0009966 - regulation of signal transduction [Evidence ISS]; GO:0045449 - regulation of transcription [Evidence ISS]; GO:0042542 - response to hydrogen peroxide [Evidence ISS]; GO:0010033 - response to organic substance [Evidence ISS]; GO:0009268 - response to pH [Evidence ISS]; GO:0009266 - response to temperature stimulus [Evidence ISS]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : isoform b is encoded by transcript variant 3 product : glutaredoxin 2 isoform b protein_id : NP_001033682.1

name	Glrx2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84370335 CCDS:CCDS15344.1 GeneID:69367 MGI:1916617
definition	GO_component : GO:0005739 - mitochondrion [Evidence ISS] [Evidence IEA]; GO:0005634 - nucleus [Evidence ISS] [Evidence IEA] GO_function : GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0008794 - arsenate reductase (glutaredoxin) activity [Evidence ISS]; GO:0009055 - electron carrier activity [Evidence IEA]; GO:0009053 - electron donor activity [Evidence ISS]; GO:0015038 - glutathione disulfide oxidoreductase activity [Evidence ISS]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0015035 - protein disulfide oxidoreductase activity [Evidence IEA]; GO:0030508 - thiol-disulfide exchange intermediate activity [Evidence ISS]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006915 - apoptosis [Evidence ISS]; GO:0030154 - cell differentiation [Evidence ISS]; GO:0045454 - cell redox homeostasis [Evidence IEA]; GO:0042262 - DNA protection [Evidence ISS]; GO:0006749 - glutathione metabolism [Evidence ISS]; GO:0006467 - protein thiol-disulfide exchange [Evidence ISS]; GO:0006980 - redox signal response [Evidence ISS]; GO:0030503 - regulation of cell redox homeostasis [Evidence ISS]; GO:0009966 - regulation of signal transduction [Evidence ISS]; GO:0045449 - regulation of transcription [Evidence ISS]; GO:0042542 - response to hydrogen peroxide [Evidence ISS]; GO:0010033 - response to organic substance [Evidence ISS]; GO:0009268 - response to pH [Evidence ISS]; GO:0009266 - response to temperature stimulus [Evidence ISS]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : isoform b is encoded by transcript variant 4 product : glutaredoxin 2 isoform b protein_id : NP_001033683.1

name	Glrx2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84370330 CCDS:CCDS15344.1 GeneID:69367 MGI:1916617
definition	GO_component : GO:0005739 - mitochondrion [Evidence ISS] [Evidence IEA]; GO:0005634 - nucleus [Evidence ISS] [Evidence IEA] GO_function : GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0008794 - arsenate reductase (glutaredoxin) activity [Evidence ISS]; GO:0009055 - electron carrier activity [Evidence IEA]; GO:0009053 - electron donor activity [Evidence ISS]; GO:0015038 - glutathione disulfide oxidoreductase activity [Evidence ISS]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0015035 - protein disulfide oxidoreductase activity [Evidence IEA]; GO:0030508 - thiol-disulfide exchange intermediate activity [Evidence ISS]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006915 - apoptosis [Evidence ISS]; GO:0030154 - cell differentiation [Evidence ISS]; GO:0045454 - cell redox homeostasis [Evidence IEA]; GO:0042262 - DNA protection [Evidence ISS]; GO:0006749 - glutathione metabolism [Evidence ISS]; GO:0006467 - protein thiol-disulfide exchange [Evidence ISS]; GO:0006980 - redox signal response [Evidence ISS]; GO:0030503 - regulation of cell redox homeostasis [Evidence ISS]; GO:0009966 - regulation of signal transduction [Evidence ISS]; GO:0045449 - regulation of transcription [Evidence ISS]; GO:0042542 - response to hydrogen peroxide [Evidence ISS]; GO:0010033 - response to organic substance [Evidence ISS]; GO:0009268 - response to pH [Evidence ISS]; GO:0009266 - response to temperature stimulus [Evidence ISS]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : isoform b is encoded by transcript variant 2 product : glutaredoxin 2 isoform b protein_id : NP_075994.2

name	Trove2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7305523 CCDS:CCDS15345.1 GeneID:20822 MGI:106652
definition	GO_component : GO:0030529 - ribonucleoprotein complex [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence ISS]; GO:0003723 - RNA binding [Evidence ISS] [Evidence IEA] codon_start : 1 note : Sjogren syndrome antigen A2 product : TROVE domain family, member 2 protein_id : NP_038863.1

name	Uchl5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9625047 CCDS:CCDS15346.1 GeneID:56207 MGI:1914848
definition	GO_component : GO:0005829 - cytosol [Evidence IEA]; GO:0005622 - intracellular [Evidence IEA]; GO:0043234 - protein complex [Evidence IEA] GO_function : GO:0008234 - cysteine-type peptidase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0004221 - ubiquitin thiolesterase activity [Evidence IEA] GO_process : GO:0006512 - ubiquitin cycle [Evidence IEA]; GO:0006511 - ubiquitin-dependent protein catabolism [Evidence IEA] codon_start : 1 exception : mismatches in translation note : biquitin carboxyl-terminal esterase L5 product : ubiquitin C-terminal hydrolase 37 protein_id : NP_062508.1

name	Rgs2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31543586 CCDS:CCDS15347.1 GeneID:19735 MGI:1098271
definition	GO_component : GO:0005634 - nucleus [Evidence TAS] GO_function : GO:0005096 - GTPase activator activity [Evidence TAS]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence TAS]; GO:0009968 - negative regulation of signal transduction [Evidence IEA]; GO:0007169 - transmembrane receptor protein tyrosine kinase signaling pathway [Evidence NAS] codon_start : 1 product : regulator of G-protein signaling 2 protein_id : NP_033087.2

name	Rgs13 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23346630 CCDS:CCDS15348.1 GeneID:246709 MGI:2180585
definition	GO_component : GO:0005829 - cytosol [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA]; GO:0005886 - plasma membrane [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0016299 - regulator of G-protein signaling activity [Evidence IDA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IPI]; GO:0045744 - negative regulation of G-protein coupled receptor protein signaling pathway [Evidence IDA]; GO:0009968 - negative regulation of signal transduction [Evidence IEA] codon_start : 1 product : regulator of G-protein signaling 13 protein_id : NP_694811.1

name	Rgs1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7657512 CCDS:CCDS15349.1 GeneID:50778 MGI:1354694
definition	GO_component : GO:0005886 - plasma membrane [Evidence TAS] GO_function : GO:0005096 - GTPase activator activity [Evidence TAS]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence TAS]; GO:0009968 - negative regulation of signal transduction [Evidence IEA] codon_start : 1 product : regulator of G-protein signaling 1 protein_id : NP_056626.1

name	Rgs21 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149234326 GeneID:624910 MGI:3645243
definition	codon_start : 1 product : similar to RGS protein_id : XP_894544.3

name	EG639456 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:639456
definition	number : 1 pseudo : _no_value

name	(CDS detail)
type	STS
link
xref	UniSTS:123321
definition	standard_name : 16.MMHAP84FRF7.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:210552
definition	standard_name : RH136572

name	(CDS detail)
type	STS
link
xref	UniSTS:207227
definition	standard_name : RH127034

name	(CDS detail)
type	STS
link
xref	UniSTS:463990
definition	standard_name : HRPT2__6588

name	(CDS detail)
type	STS
link
xref	UniSTS:231578
definition	standard_name : RH142331

name	(CDS detail)
type	STS
link
xref	UniSTS:495935
definition	standard_name : B3galt2

name	(CDS detail)
type	STS
link
xref	UniSTS:231712
definition	standard_name : RH142465

name	(CDS detail)
type	STS
link
xref	UniSTS:178447
definition	standard_name : AI645710

name	(CDS detail)
type	STS
link
xref	UniSTS:217597
definition	standard_name : RH134315

name	(CDS detail)
type	STS
link
xref	UniSTS:178446
definition	standard_name : AI646302

name	(CDS detail)
type	STS
link
xref	UniSTS:234230
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:178445
definition	standard_name : U66843

name	(CDS detail)
type	STS
link
xref	UniSTS:128789
definition	standard_name : D1Mit423

name	(CDS detail)
type	STS
link
xref	UniSTS:128437
definition	standard_name : D1Mit100

name	(CDS detail)
type	STS
link
xref	UniSTS:163098
definition	standard_name : RH126390

name	(CDS detail)
type	STS
link
xref	UniSTS:214314
definition	standard_name : RH131031

name	(CDS detail)
type	STS
link
xref	UniSTS:158860
definition	standard_name : U67187

name	(CDS detail)
type	STS
link
xref	UniSTS:239147
definition	standard_name : Rgs13

name	(CDS detail)
type	STS
link
xref	UniSTS:128867
definition	standard_name : D1Mit499

name	(CDS detail)
type	STS
link
xref	UniSTS:128756
definition	standard_name : D1Mit395

name	(CDS detail)
type	STS
link
xref	UniSTS:124599
definition	standard_name : 45.MMHAP94FLG6.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:125377
definition	standard_name : MHAa84b2.seq

name	LOC545369 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149234324 GeneID:545369
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1986 ESTs, 7 Proteins product : similar to ribosomal protein L4 pseudo : _no_value transcript_id : XR_034542.1

clone name	MSMg01-269J01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-202M08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-202M09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-375P16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-234N17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-387K14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-214C24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-093A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-491L16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-129O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389G01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-088D01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-208D07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-074L14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-141O04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-437B23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-136B07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488K08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-146A19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-349A23
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-334P09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-431G04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-050E05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-135H10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-119B23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-434M04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-076E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-519F04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-168M09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-088K18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-386F21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-205G06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-419K18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-347P23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-300G16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-362N22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-318L11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-303B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-494G04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-111C11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-392B22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-447E10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-473O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-337D12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-323O24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-296N06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-338K17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-319A10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460P20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-105C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-408B19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-548C15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-296M03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-068G10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-431C20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-268P19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-331G09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-475G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-501M09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-263L10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-156F05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-324C01
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-110N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-359K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-330C14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-201P07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-062H16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-441K04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-117J01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-123N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-395D09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-383F10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-524K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-313M15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-360H06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-397E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-420B03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-167P23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-065P10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132C23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-369N05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-401D02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-504N06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-080K09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-334G08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-343D22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-004E17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-331F16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-090P22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174G15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-210O12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-096D01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-025J02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-341D19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-199I12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-286N04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-264L11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-304E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313E23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-027A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099O20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-266M19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129K10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050O16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270B16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-231P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317C18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-099L12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-244M08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292A02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-119O01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-136A23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221O16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-145C06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-170H10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-019O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026I15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006M01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-303P14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-001O01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-131G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126P20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-281P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-165A05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-004F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105A16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-014L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184G02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-268I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144C07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-196E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143L07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-079P23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121L16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103G19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-229E03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-311K22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-155K20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-303O24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-261P08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-142N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048C06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-343O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335P07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-252A11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-008H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183A14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-152K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152M04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-088P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279E23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-261O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042A15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-041M10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-312M08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-066F20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-194C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320G11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-344P22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120O16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-027J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-221D17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-083D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169J20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-326K02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-136P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065O20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-258P24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-207B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104J06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-104K06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-203F15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-082P17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-091B11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098O17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-256K20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-238M15
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-473O11.T7 (MSMg01no473_o11.b1)	MSMg01-473O11.TJ (MSMg01no473_o11.g1)
ACC	AG556093	AG556094
length	947	760
length of high quality (start - end)	---	590 (79 - 668)
definition	CHROMAT_FILE: MSMg01no473_o11.b1 PHD_FILE: MSMg01no473_o11.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 19:52:10 2005	CHROMAT_FILE: MSMg01no473_o11.g1 PHD_FILE: MSMg01no473_o11.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 19:52:10 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	CCTCCCTCGTTCTTCCTTCCGCCTNTACGTCGCTTTTCTCTTCCCCGGCG GGTGGGGGCGTCTTCTTCGCCTGCTCTCTCTCCCTCTCTGCGCCCACCCT TTTCTTGATTGAGTGGTTCCCCACTCCTTGCTTCGTTCTTGTTCTTCGCC TTTCTTCGCTCATATGCTGTATACTACTTTTTTTGTCTTGGTTTTGATTC GGTGTTTTGATGGTCCGCTTGTGGGCCGTTTGTCTACTCGCGTGCTCGGT GGCTTGTTTTTTGTTTCTCTCTACCTTCTCCCTCCCTCCCCTTCTCTGTT GTTTTTTCTCTTGCCTTGGCTGGCGCTGGTGTCCCGCTGGTCTTTGTGCG GTCCGTTGCTCCGTGGTGTGTGTTGGCGCTTTGTTGCGACTCCGGTCGTC TCTCACGCGTCCTTTGTTGTAGGCGCGTCCTCATTCCTTCATTGTGGCGG CCTCGTATGGTTTGCACTTCGTCGGGTGTTTGCCGTTGTTTGTGCCCGCG TTTATTGGCGTTGCGCTTGTTTTCTTCTTTTCACCGTCCCCTCTTCTCCG CTGCGTTTTCTTTCGCGTCTCGTCGCTCGCGCGCGCTGTGTGTTTACTCC GCCGCTCCTTTACTTCCCTTCTGGTGTGCGCGTGGCCCTACCTTCGCTTG TATGGGCGCTCCGTGCTCGGCTGTCGGTGCGGCTTTTCCTCGTGTTCTGT TCTCGCCTCCCTTCCGTTCTCTTCCCCCTTCGCCCTCTTTACTAACTATC CCCTTTGTCTCCTTCTTCTCGCTCGGTTTTAGTCGTCCTTGCTCCCCTTC TCGTGTCCTTTCTCGTTCTTCGGGCGGTTCCATCTCTGGCTGCTGCCCTC TCTTGTTATGTATCTCGCGTTCCGTCCTGCGGTCTCGGTTGCGCCTGTTC TGTGTCGCTCCACCCTTCCTCCCACGCTGCTCTTTCTGCGCGCCATG	GGCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXACACACACACACACACACACAC ACACACACACACACACACACACACACACACCCCAAAACACTCTTTAAAAA AAAGAATAATGAAACAGTTGATTATAAGTCCCTTTGATCCCAACGTTATC AACTCACCACTATCTTAAAAGGGTCAGATACGAGCCAAAAACCTGTCCAG CTATTTTCTGTCAAGGGTAAATTGAATAGGGCATCGGAGGCCCTCTACCT CCTCTTCTGTGAGCATCTGAACTGGCAAAAGCAACCTGACCATAATGTTT TCCTGTTAAATAATTTGACACCATCAACAGTCAGCTCAAAACACACTTTG ACTTTATGGAACAAGATAAAACAAGGCAGTTCAAACACAGCTAAATATAG CCACTGGAGCTTGTACTTCATTTCCAATTACAGTTTCACCTTCATCTATT TCTTTATTCATTCATACCTTCTAGAGACAGAAAAACAATAATTCTGTGGG CCAAATCTATCCTCTTTTTTTTTCCTTTTACAAAATCTATTTTTGGTGCT GACAAATGAACAATTATTACATATATGTTCTAACACTTAAGTATGCTAAC CAGCTCCTCTTTTTTTGTACCATATTTAGGAAAAGAATAGCTTTAACACC TTAAAATAATTTTAGAAATCAACAAGAATCTGTGAATGAGCATATGGGAG GCCCAGGTCT
quality values	Open. Hide. 6 6 6 6 6 8 8 8 8 8 8 9 9 8 8 10 9 8 8 8 8 6 8 3 0 3 8 8 8 8 8 8 8 8 10 8 8 8 8 8 8 8 9 9 10 10 10 9 9 8 8 8 8 8 8 9 11 11 11 11 11 8 8 8 9 8 8 8 8 8 8 8 10 10 16 13 13 11 11 10 15 12 12 9 8 8 8 11 8 8 8 8 8 8 8 6 6 8 6 12 8 8 10 10 8 8 8 8 8 8 8 8 8 6 6 8 8 9 9 9 8 8 6 6 8 8 12 10 8 6 6 8 8 10 9 10 10 10 10 10 12 12 11 11 9 9 9 8 8 10 9 9 9 11 10 10 8 10 10 8 8 6 6 8 8 10 10 16 21 12 12 12 9 9 8 8 8 8 17 19 22 13 13 10 10 11 8 8 8 8 8 8 9 12 8 8 6 7 8 6 8 7 7 9 9 8 8 6 6 8 8 7 7 8 10 8 8 8 8 8 8 8 8 8 8 8 8 8 10 10 8 10 10 10 9 9 10 11 8 8 8 8 8 8 10 10 11 11 11 8 8 8 10 8 8 10 13 8 10 8 10 10 12 15 15 9 9 9 9 10 9 9 9 9 19 12 16 11 10 10 13 10 10 9 19 16 11 8 8 8 8 8 8 6 6 6 6 8 8 8 10 12 12 10 8 10 9 9 9 8 8 8 8 8 8 8 8 7 7 8 8 8 8 8 8 8 8 8 10 10 10 10 10 12 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 11 11 9 9 8 8 8 8 9 9 9 9 12 12 8 8 6 6 10 8 7 7 8 8 12 12 8 8 8 8 8 8 8 8 8 8 8 8 6 6 6 8 8 8 8 8 8 8 10 8 8 8 10 8 8 6 6 8 8 8 8 8 8 8 8 8 6 6 11 10 8 9 8 8 6 6 6 6 8 8 8 6 6 6 6 10 12 12 10 6 6 6 8 12 12 10 10 9 10 9 9 9 9 9 9 10 10 11 11 15 10 13 10 11 8 8 8 8 8 8 8 8 9 11 11 10 8 8 8 8 8 8 8 6 8 6 6 8 8 10 8 8 6 6 8 8 8 10 10 10 13 10 8 8 8 8 8 8 8 8 10 10 6 6 8 8 8 10 8 6 6 8 16 16 11 11 11 10 15 8 10 6 6 8 8 8 6 6 8 8 10 8 8 9 9 12 12 12 10 10 9 9 9 8 8 8 8 8 8 10 10 11 11 8 12 8 8 8 8 9 12 12 15 15 14 14 14 15 19 11 10 8 7 7 8 8 8 8 7 9 10 10 7 6 8 6 6 8 8 8 8 8 8 10 8 8 8 8 8 13 12 8 8 8 8 8 12 13 12 9 9 9 9 8 8 8 8 10 8 8 8 6 6 8 8 11 8 8 8 8 8 8 16 16 9 9 9 9 8 8 6 6 8 8 8 8 8 8 8 8 8 8 8 6 6 6 8 8 10 8 8 11 8 6 6 6 8 8 8 8 8 8 6 6 7 8 10 10 8 8 8 8 10 10 10 10 15 8 8 7 7 13 12 13 10 8 8 8 8 8 9 10 10 10 10 10 8 8 8 10 10 10 10 10 8 8 8 8 10 12 8 6 6 8 6 9 12 8 8 8 8 8 8 8 8 8 8 8 8 8 8 10 10 10 10 10 10 9 10 10 12 11 7 6 8 8 8 10 9 9 9 9 10 9 9 9 9 10 10 11 11 10 9 9 9 8 8 8 8 8 8 8 8 8 12 10 10 9 9 9 9 9 9 9 8 8 8 8 8 6 6 8 8 8 8 8 8 8 10 10 9 9 9 8 8 6 6 8 8 8 8 8 8 8 10 10 10 10 8 6 6 8 8 8 8 8 10 10 12 9 7 8 8 8 6 6 8 7 8 7 7 9 6 8 6 6 6 7 8 8 9 11 8 6 6 6 8 8 8 8 8 8 8 8 7 8 8 10 8 8 8 8 8 9 8 8 8 8 10 8 8 8 8 8 8 8 8 9 10 8 10 8 8 8 13 10 11 8 8 8 8 8 8 8 8 8 8 8 6 8 7 7 8 8 10 8 8 9 9 11 14 15 8 8 6 6 6 6	Open. Hide. 7 7 6 6 6 13 10 8 8 6 8 7 8 9 9 9 11 27 28 34 31 39 39 39 39 34 35 24 25 32 30 15 23 9 6 6 6 6 6 8 19 9 21 21 34 25 39 38 34 39 34 34 37 37 37 37 37 50 42 41 28 21 10 7 7 8 8 15 19 32 47 47 31 31 31 31 36 36 36 36 38 50 50 50 50 50 53 53 53 53 50 43 43 47 47 47 47 47 47 47 47 47 51 47 43 50 50 50 50 50 50 50 50 50 50 50 50 50 50 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 57 57 57 47 47 47 57 57 57 57 57 68 68 68 68 68 68 68 57 50 50 50 46 46 50 50 50 51 68 57 57 57 57 50 51 50 50 50 68 57 57 57 59 59 59 59 59 68 68 68 68 68 68 68 68 68 68 59 59 59 57 68 68 68 68 68 68 68 68 68 68 57 57 59 59 68 68 68 68 59 59 59 68 68 59 57 57 57 57 57 57 57 57 57 57 52 52 59 57 68 68 68 68 68 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 68 68 68 62 62 62 62 62 62 62 62 62 62 62 62 62 62 68 68 62 62 62 68 68 62 62 62 62 62 62 62 68 68 68 68 68 68 68 62 62 68 68 68 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 68 68 68 68 68 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 68 68 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 62 68 62 57 57 57 57 59 59 59 59 59 59 59 57 68 57 68 68 57 68 68 68 68 68 68 68 68 68 68 59 59 59 59 57 57 57 57 57 57 59 68 68 68 68 68 68 68 57 57 57 57 54 59 59 52 57 52 59 59 59 59 59 59 59 59 59 68 68 68 68 57 68 68 57 57 57 57 57 57 57 57 57 57 54 57 59 59 59 59 57 57 57 57 57 59 59 57 57 57 57 47 47 48 59 59 59 54 54 42 44 42 43 43 47 57 57 48 48 48 57 59 57 57 57 59 57 57 57 57 54 54 54 57 57 54 54 54 54 54 57 57 48 46 43 43 43 48 50 50 48 57 48 48 48 59 59 59 57 48 48 48 48 48 48 48 48 48 37 37 30 30 30 36 34 32 31 37 37 41 41 39 39 39 43 43 46 46 48 48 48 59 59 59 59 53 53 48 48 41 40 40 34 34 23 23 20 24 32 36 36 32 34 30 33 33 39 37 30 25 15 18 14 24 24 34 32 25 22 22 34 36 37 34 34 28 22 22 30 24 36 28 27 32 25 25 25 34 34 34 34 23 23 23 31 30 26 22 25 25 24 27 20 22 16 22 22 23 34 30 36 15 11 9 8 8 8 14 14 18 26 24 30 30 25 25 37 37 39 32 27 10 10 8 8 8 10 10 15 14 12 15 12 12 12 17 15 16 9 9 9 9 9 9 11 16 27 17 21 16 14 14 14 12 12 12 18 19 11 12 9 11 11 17 17 25 13 13 10 10 10 19 11 11 11 11 12 17 18 15 15 12 16 12 12 12 11 11 10 16 10 10 10 10 11 9 9 9 9 13 13 18 14 13 9 8 8 9 10 10 8 8 10 10 10

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no473_o11.g1 MSMg01no473_o11.g1 CHROMAT_FILE:
MSMg01no473_o11.g1 PHD_FILE: MSMg01no473_o11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:52:10 2005
         (590 letters)



>mm_chr1_145564854_145565842
          Length = 989

 Score = 1009 bits (522), Expect = 0.0
 Identities = 563/578 (97%), Gaps = 7/578 (1%)
 Strand = Plus / Minus

                                                                       
Query: 16  cacacacacacacacacacacacacacacacacacaccccaaaacactctt--taaaaaa 73
           ||||||||||||||||||||||||||||||||||||| |||||||||||||   ||||||
Sbjct: 827 cacacacacacacacacacacacacacacacacacacaccaaaacactcttaaaaaaaaa 768

                                                                       
Query: 74  aagaataatgaaacagttgattataagtccctttgatcccaacgttatcaactcaccact 133
           ||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||
Sbjct: 767 aagaataatgaaacagttgattatacgtccctttgatcccaacgttatcaacccaccact 708

                                                                       
Query: 134 atcttaaaagggtcagatacgagccaaaaacctgtccagctattttctgtcaagggtaaa 193
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 707 atcttaaaagggtcagatatgagccaaaaacctgtccagctattttctgtcaagggtaaa 648

                                                                       
Query: 194 ttgaatagggcatcggaggccctctacctcctcttctgtgagcatctgaactggcaaaag 253
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 647 ttgaatagggcatcggaggccctctacctcctctcctgtgagcatctgaactggcaaaag 588

                                                                       
Query: 254 caacctgaccataatgttttcctgttaaataatttgacaccatcaacagtcagctcaaaa 313
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 caacctgaccataatgttttcctgttaaataatttgacaccatcaacagtcagctcaaaa 528

                                                                       
Query: 314 cacactttgactttatggaacaagataaaacaaggcagttcaaacacagctaaatatagc 373
           |||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||
Sbjct: 527 cacactttgactttatggaacaagataaaacaaggcagttcaa--acagctaaatatagc 470

                                                                       
Query: 374 cactggagct-tgtacttcatttccaattacagtttcaccttcatctatttctttattca 432
           |||||||||| | |||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 469 cactggagctct-tacttcatttccaattacagtttcaccttcatctatgtctttattca 411

                                                                       
Query: 433 ttcataccttctagagacagaaaaacaataattctgtgggccaaatctatcctctttttt 492
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 410 ttcataccttctagagacag-aaaacaataattctgtgggccaaatctatcctctttttt 352

                                                                       
Query: 493 tttccttttacaaaatctatttttggtgctgacaaatgaacaattattacatatatgttc 552
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 tttccttttgcaaaatctatttttggtgctgacaaatgaacaattattacatatatgttc 292

                                                 
Query: 553 taacacttaagtatgctaaccagctcctctttttttgt 590
           ||||||||||||||||||||||||||||||||||||||
Sbjct: 291 taacacttaagtatgctaaccagctcctctttttttgt 254


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 67
Number of extensions: 21
Number of successful extensions: 21
Number of sequences better than 10.0: 1
Number of HSP's gapped: 15
Number of HSP's successfully gapped: 1
Length of query: 590
Length of database: 989
Length adjustment: 10
Effective length of query: 580
Effective length of database: 979
Effective search space:   567820
Effective search space used:   567820
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information