NNTTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCAGAAATCCGCG
GAATTCTGAGACTGTTCAAGAGTTCATTGGCTGCATTCTGCTGTGTTTCA
TTGTTATTTTGCTTGTTTTTGTTTTGTTTTGTTTTACAGGAATGCCCACA
ACTGCTACCAAATAGCTGTGAACCTAACCGTTTTAAAAAACCACTGGTGT
GACTCTTCCATGGAGGGGAGTCCCGTAAATTCACCAGATGTGTACCAGCA
AATATTACCCATAGGAAAATCGGGCAGTCTGAATTGTCATCTCTACTTCC
CAGAAAGTTGTGCTTTGGATTCTATATAATGGTATAAGGTAAAACCAAAC
CCAAACCCAAACCAAACAAAACCAAACCAACAACAATAACAAAACAACAA
TGAAATCCTCTATTGATAATGTTTTCTCCTCTTATATAAAACCCACTTTC
CCCACCAAGGGGAAAGCTTTCTGGATTCTCAGAAAGCCCCCTTCAGGGCA
GGTTTGGTATATAGTTGGTGCACCTGAGACAGGTGGTAGTAATTTTGATA
ATTACTTTTAACTTATGATTGTTATTGTTTTAAAATGTTGGACCTTCTCC
ATACCCCAAATTTATCCGTTTTTTTCAAGTCCCCGGCCCTTCCTTCCTCC
TTTCTTCCTTTCCTTCTCTCCTCCCCTTCCTTCATTCCTATCCTTCCTTC
CTTCCTTCCTTCTCCTTCTATCATCCATACCCCCCTCCCTCCCTCCCATT

NNCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCAG
AGAAGCACTTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAA
ATCAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGAT
CAAAAATTCAGGTGACAGCAGATGCTGGCGAGGATGTGGAGAAAGAGGAA
CACTACTCCATTGTTGGTGGGAGTGCAGGCTTGTACAACCACTCTGGAAA
TCAGTCTGGCGGTTCCTCAGAAAACTGGACATAGTACTACCGGAGGATCC
AGCAATACCTCTCCTGGGCATATATCCAGAAGATGCCCCAACTGGTAAGA
AGGACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGA
AGCTGGAAAGAACCTAGATGCCCCTCAACAGAGGAATGGATACAGAANAT
GTGGTACATCTACACAATGGAGTACTACTCAGCTATTANNAAGAATGAAT
TTATGAAATTCCTAGCCCAATGGATGGACCTGGAGGGCATCATCCCTGAG
TGAGGTAACACATTCTCAAGGAAACTCCCCCCAAATGTATTTCCTGAATA
AGTGGAAATTAACCCCCAACCTAGGAAACCCCCGAAATAAAATATAATTT
GTTTAAACCTTGAAACTCTCGGAAAATGAAAACCGAAAGGTGGGCCG

Query= MSMg01no474_g22.b1 MSMg01no474_g22.b1 CHROMAT_FILE:
MSMg01no474_g22.b1 PHD_FILE: MSMg01no474_g22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:52:53 2005
         (457 letters)



>mm_chr1_40385550_40386406
          Length = 857

 Score =  868 bits (449), Expect = 0.0
 Identities = 455/457 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   tcattggctgcattctgctgtgtttcattgttattttgcttgtttttgttttgttttgtt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcattggctgcattctgctgtgtttcattgttattttgcttgtttttgttttgttttgtt 260

                                                                       
Query: 61  ttacaggaatgcccacaactgctaccaaatagctgtgaacctaaccgttttaaaaaacca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttacaggaatgcccacaactgctaccaaatagctgtgaacctaaccgttttaaaaaacca 320

                                                                       
Query: 121 ctggtgtgactcttccatggaggggagtcccgtaaattcaccagatgtgtaccagcaaat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctggtgtgactcttccatggaggggagtcccgtaaattcaccagatgtgtaccagcaaat 380

                                                                       
Query: 181 attacccataggaaaatcgggcagtctgaattgtcatctctacttcccagaaagttgtgc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 attacccataggaaaatcgggcagtctgaattgtcatctctacttcccagaaagttgtgc 440

                                                                       
Query: 241 tttggattctatataatggtataaggtaaaaccaaacccaaacccaaaccaaacaaaacc 300
           ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tttggattcaataaaatggtataaggtaaaaccaaacccaaacccaaaccaaacaaaacc 500

                                                                       
Query: 301 aaaccaacaacaataacaaaacaacaatgaaatcctctattgataatgttttctcctctt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaaccaacaacaataacaaaacaacaatgaaatcctctattgataatgttttctcctctt 560

                                                                       
Query: 361 atataaaacccactttccccaccaaggggaaagctttctggattctcagaaagccccctt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atataaaacccactttccccaccaaggggaaagctttctggattctcagaaagccccctt 620

                                                
Query: 421 cagggcaggtttggtatatagttggtgcacctgagac 457
           |||||||||||||||||||||||||||||||||||||
Sbjct: 621 cagggcaggtttggtatatagttggtgcacctgagac 657


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 457
Length of database: 857
Length adjustment: 10
Effective length of query: 447
Effective length of database: 847
Effective search space:   378609
Effective search space used:   378609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)