Query= MSMg01no475_g17.b1 MSMg01no475_g17.b1 CHROMAT_FILE:
MSMg01no475_g17.b1 PHD_FILE: MSMg01no475_g17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:54:11 2005
(274 letters)
>mm_chr1_38545848_38546522
Length = 675
Score = 290 bits (150), Expect = 5e-83
Identities = 168/174 (96%), Gaps = 1/174 (0%)
Strand = Plus / Minus
Query: 5 gaattcttaaggtgtac-cctcacactcttccagacaaggcagcagtgctgagctttgta 63
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gaattcttaaggtgtacaactcacactcttccagacaaggcagcagtgctgagctttgta 302
Query: 64 ctatctgggagtttcttgcttccttttcagtctcctgacccactcagaaaccccttgctg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ctatctgggagtttcttgcttccttttcagtctcctgacccactcagaaaccccttgctg 242
Query: 124 agcttgcctgtgacggactgaccgcactgcaggaataacgcacgcacgcacgca 177
||||||||| |||||||| | ||||||| |||||||||||||||||||||||||
Sbjct: 241 agcttgcctttgacggaccggccgcactacaggaataacgcacgcacgcacgca 188
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 274
Length of database: 675
Length adjustment: 9
Effective length of query: 265
Effective length of database: 666
Effective search space: 176490
Effective search space used: 176490
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no475_g17.g1 MSMg01no475_g17.g1 CHROMAT_FILE:
MSMg01no475_g17.g1 PHD_FILE: MSMg01no475_g17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:54:11 2005
(430 letters)
>mm_chr1_38351546_38352375
Length = 830
Score = 785 bits (406), Expect = 0.0
Identities = 424/434 (97%), Gaps = 8/434 (1%)
Strand = Plus / Plus
Query: 1 ttcagagactgtactctgactcggcccaggttccttcagacgtccaattcatcatgtgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttcagagactgtactctgactcggcccaggttccttcagacgtccaattcatcatgtgtt 260
Query: 61 tcaacagttcatactttttactgccaactaatatataacgctgtgaacatggagttggtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcaacagttcatactttttactgccaactaatatataacgctgtgaacatggagttggtt 320
Query: 121 tccagtttgggacttttacaaataaaactgctatgaaccttcatgtacaagttgcgtgaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tccagtttgggacttttacaaataaaactgctatgaaccttcatgtacaagttgcgtgaa 380
Query: 181 aataaaatctcatttctctgggatgtatgcccaagactgtgacttctggtccatttttag 240
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 381 aataaaatctcatttctctgggatgtatgcccaagagtgtgacttctggtccatttttag 440
Query: 241 ccattttta----gaattgccaaacttgtctcttttttggcaatggctatagtgttttac 296
|||| | ||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 441 ccat----aaaaagaattgccaaacttgtctcttttttggcaatggttatagtgttttac 496
Query: 297 gtttgcagcagggctgtgcttactgatccaggtcctcttcatccttgccaacatgtgcag 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 gtttgcagcagggctgtgcttactgatccaggtcctcttcatccttgccaacatgtgcag 556
Query: 357 ttggtgtagtctttattttagccaatgtgatcgtgtaacaataacttattgaggcttttg 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 ttggtgtagtctttattttagccaatgtgatcgtgtaacaataacttattgaggcttttg 616
Query: 417 agttacattttgta 430
||||||||||||||
Sbjct: 617 agttacattttgta 630
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 430
Length of database: 830
Length adjustment: 9
Effective length of query: 421
Effective length of database: 821
Effective search space: 345641
Effective search space used: 345641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
