CGCCGCTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTTCCAAATC
CGCGGAATTCTTTGTTCTTGTCCGAGCCCCATTTTTTAATGGGGTTATTT
GATTTTCTAAAGTCCACCTTCTTGAGTTCTTTATATATGTTGGATATTAG
TCCCCTATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTG
GTCTTTTTGTCTTATTGACGGTGTCTTTTGCCTTGCAGAAACTTTGGAGT
TTCATTAGGTCCCATTTGTCAATTCTCGATCTTACAGCACAAGCCATTGC
TGTTCTGTTCAGGAATTTTTCCCCTGTGTTTTTATCTTCAAGGCTTTTCC
CCACTTTCTCCTCTATAAGTTTGAGTGTCTCTGGTTTTATGTGAAGTTCT
TTGATCCATTTAGATTTGACCTTAGCACAAGGAGATAAGTAAGGATCGAT
TTGCATTCTTCTACATGATAACAACCAGTTGTGCCAGCACCAATTGTTGC
ATATGCTGTCTTTCTTCAACTGTATGATTTTAGCTCCCTTGTCCAATGTC
AAGTGACCATACGTTGCGTTGTCTCTTTTCTGGCTCTTTTTTTTTATTTC
TTTGCCCCATTTGTCCTGCTTCCCTTCTTTCCCCCTGTCTCTTCTTTTCC
TATCGTCTCCTGCCGATTTCTTTTGTCCTTTATTTGCCATCCTATCATTA
CTCCTTTTTTTTTCTTTAAAAATTTTCATCTTCTCTTTTCCACCCCTTCT
TTTTTTTT

TTTCCCGAAGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCATTCTGCTGGAAGAACCAA
AGGACACCTGTTCTCTACTTATTTAGTTGGATTCTGTGGCACTTGGTTTG
AACAAAAATAGAATCTATAGCAATAGCACAAAACTTGCTCTATATTCTAA
GCATGCCTGTCTATAAGAGAAGAATCACTTCATATGTCAGCAACCCTGAA
AGAGAAAAACCAAAGACAAAACACCATGTCTGCTTCTCAGATTCCATCTA
AACATGACAGGTCAGTAATAGGAAGAGAGATTGTCTTAATATTTATTAAG
ATTTTATAGTAGCTAATATAACTTTTCCAACATGTTTTCTAGTGATTCCT
CGCAGTAATTGTTAGTGAGGCAAAATATGAATGGAAACTTCCAATTGAAG
CCTGTCAGGAGAAAACTATACTTGGTATCTGTTTGTGGTTCCTGACACAA
AGCTCCCAAAACCCTTGCAGTCTTTGGAATGACAAGGGCTTATTTATATA
CTTATTAGGGAAGGGGCATACTCCATCCTATTACCTCCCCAATTGGAATC
GCAAATGGGCGGGCAAATTACTCTACCAAACCTCCCACGTCTTACCCCTC
CCCCTCCCTATTTCCCCATCGCCCCGGTATAAAACCACTCCCCCTTTTTT
TCGTGCCCCACTGCCCTTTTGTTTTGCCCTCCCTTATTCTTACCTCCTTC
TCTA

Query= MSMg01no475_k04.g1 MSMg01no475_k04.g1 CHROMAT_FILE:
MSMg01no475_k04.g1 PHD_FILE: MSMg01no475_k04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:54:29 2005
         (401 letters)



>mm_chr1_142137242_142138042
          Length = 801

 Score =  760 bits (393), Expect = 0.0
 Identities = 399/401 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   cattctgctggaagaaccaaaggacacctgttctctacttatttagttggattctgtggc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 cattctgctggaagaaccaaaggacacctgttctctacttatttagttggattctgtggc 542

                                                                       
Query: 61  acttggtttgaacaaaaatagaatctatagcaatagcacaaaacttgctctatattctaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 acttggtttgaacaaaaatagaatctatagcaatagcacaaaacttgctctatattctaa 482

                                                                       
Query: 121 gcatgcctgtctataagagaagaatcacttcatatgtcagcaaccctgaaagagaaaaac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gcatgcctgtctataagagaagaatcacttcatatgtcagcaaccctgaaagagaaaaac 422

                                                                       
Query: 181 caaagacaaaacaccatgtctgcttctcagattccatctaaacatgacaggtcagtaata 240
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 caaagacaaaacaccacgtctgcttctcagattccatctaaacatgacaggtcagtaata 362

                                                                       
Query: 241 ggaagagagattgtcttaatatttattaagattttatagtagctaatataacttttccaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagagagattgtcttaatatttattaagattttatagtagctaatataacttttccaa 302

                                                                       
Query: 301 catgttttctagtgattcctcgcagtaattgttagtgaggcaaaatatgaatggaaactt 360
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 301 catgttttctagtgattccttgcagtaattgttagtgaggcaaaatatgaatggaaactt 242

                                                    
Query: 361 ccaattgaagcctgtcaggagaaaactatacttggtatctg 401
           |||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ccaattgaagcctgtcaggagaaaactatacttggtatctg 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 401
Length of database: 801
Length adjustment: 9
Effective length of query: 392
Effective length of database: 792
Effective search space:   310464
Effective search space used:   310464
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)