Query= MSMg01no477_a18.b1 MSMg01no477_a18.b1 CHROMAT_FILE:
MSMg01no477_a18.b1 PHD_FILE: MSMg01no477_a18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:56:22 2005
(127 letters)
>mm_chr1_133583510_133584034
Length = 525
Score = 197 bits (102), Expect = 2e-55
Identities = 121/128 (94%), Gaps = 4/128 (3%)
Strand = Plus / Minus
Query: 1 tctacacaggttagctgagacactctaaagcctgcttacccaagtgagggtggtttttgg 60
|||||||||| ||||||||||||||||||||||||||||||||||| |||| ||||||
Sbjct: 325 tctacacaggaaagctgagacactctaaagcctgcttacccaagtga-ggtg--ttttgg 269
Query: 61 ttgctgaggaagcc-aggcagtgcgctgataatccctggcttatggaagctctttggttc 119
|||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 268 ttgctgaggaagccaaggcagtgcgctgataatccctggcttatggaagctccttggttc 209
Query: 120 ctggacta 127
||||||||
Sbjct: 208 ctggacta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 3
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 127
Length of database: 525
Length adjustment: 8
Effective length of query: 119
Effective length of database: 517
Effective search space: 61523
Effective search space used: 61523
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no477_a18.g1 MSMg01no477_a18.g1 CHROMAT_FILE:
MSMg01no477_a18.g1 PHD_FILE: MSMg01no477_a18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:56:22 2005
(638 letters)
>mm_chr1_133420828_133421867
Length = 1040
Score = 1166 bits (603), Expect = 0.0
Identities = 631/643 (98%), Gaps = 8/643 (1%)
Strand = Plus / Plus
Query: 1 agtgtcttggcaaatctcaagctttaatacagtacaccagaaaaaccccacctctcccag 60
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 201 agtgtcttggcaaatctcaagctttaatacagt--accagaaaaaccccacctctcccag 258
Query: 61 gtctctccaaatggtttccccttcccaaggttgcctttccacctgggcttctctacaacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 gtctctccaaatggtttccccttcccaaggttgcctttccacctgggcttctctacaacc 318
Query: 121 tttgaaataaatgtccaaacacctgtcagatttcagctgtccttcaaggaagcttgactc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 tttgaaataaatgtccaaacacctgtcagatttcagctgtccttcaaggaagcttgactc 378
Query: 181 aagacacccaaaggcaaatagcagcttttttt---tctctct--ccggagaacctcctgc 235
|||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||
Sbjct: 379 aagacacccaaaggcaaatagcagctttttttctctctctctccccggagaacctcctgc 438
Query: 236 ccctcccccattctgtccagcctttggggaaaaaactgccaaattaatggccagccccac 295
|||||||||| ||| ||||||||| |||||||||||||||||||||||| |||||||||
Sbjct: 439 ccctcccccaccctgcccagccttt-gggaaaaaactgccaaattaatggtcagccccac 497
Query: 296 aaagatattcctaaagccctcttctagtgcctatggcccctgacactgctgatccaccta 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 aaagatattcctaaagccctcttctagtgcctatggcccctgacactgctgatccaccta 557
Query: 356 tgaaaccacctctggggtcaacttaccacctgctccacccaagaaacaaacgccctgaaa 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 tgaaaccacctctggggtcaacttaccacctgctccacccaagaaacaaacgccctgaaa 617
Query: 416 attggggtggaaacgcatgcttcaccagtccgcagaacatatgctttatgctaattttca 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 attggggtggaaacgcatgcttcaccagtccgcagaacatatgctttatgctaattttca 677
Query: 476 aaatccttacctttgacctgagtatcgtactctgcgatgatctccttatcctttttgaat 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 aaatccttacctttgacctgagtatcgtactctgcgatgatctccttatcctttttgaat 737
Query: 536 ttggctggagacgtcatgttttccttctttcttccaaatccgaattgtgaattgatagat 595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 ttggctggagacgtcatgttttccttctttcttccaaatccgaattgtgaattgatagat 797
Query: 596 ccacgggaaaaatccaaccactgatatcaatgcctccaaggcc 638
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 798 ccacgggaaaaatccaaccactgatatcaatgcctccaaggcc 840
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 638
Length of database: 1040
Length adjustment: 10
Effective length of query: 628
Effective length of database: 1030
Effective search space: 646840
Effective search space used: 646840
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
