Query= MSMg01no478_i03.b1 MSMg01no478_i03.b1 CHROMAT_FILE:
MSMg01no478_i03.b1 PHD_FILE: MSMg01no478_i03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:15 2005
(636 letters)
>mm_chr1_68875153_68876189
Length = 1037
Score = 1205 bits (623), Expect = 0.0
Identities = 631/634 (99%), Gaps = 1/634 (0%)
Strand = Plus / Plus
Query: 1 attt-cacactaatctatgtcaatcaagactccttttttttttctgaatcattttgatta 59
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atttgcacactaatctatgtcaatcaagactccttttttttttctgaatcattttgatta 260
Query: 60 agttctaaatttgttaaatgctaatccatttagatattaggtgtcttttaaaaatcatgg 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agttctaaatttgttaaatgctaatccatttagatattaggtgtcttttaaaaatcatgg 320
Query: 120 gaaagcttttatgccgcctccttcttattggattttaacatattttactgtgtaaaaatt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaaagcttttatgccgcctccttcttattggattttaacatattttactgtgtaaaaatt 380
Query: 180 atcttcagtttttatacatttccatattcataaaatcgctattgttctatgactaattct 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atcttcagtttttatacatttccatattcataaaatcgctattgttctatgactaattct 440
Query: 240 aatgtcaaacataactaattgaattaacttttaacattattttaagaacatgctaactga 299
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 441 aatgtcaaacataactaattgaaataacttttaacattattttaagaacatgctaactga 500
Query: 300 aagtgctacaaaaatcagcatataaaattaaggccaaattcagaactttttaacatttgg 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aagtgctacaaaaatcagcatataaaattaaggccaaattcagaactttttaacatttgg 560
Query: 360 gaaaataattattctgctaatattttcatggtggtgaaatcaatcaccaggacacaactg 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gaaaataattattctgctaatattttcatggtggtgaaatcaatcaccaggacacaactg 620
Query: 420 gaaaagggaaacttcgtcatcagggtggttagtctgttgactaactgcattgatctgtca 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gaaaagggaaacttcgtcatcagggtggttagtctgttgactaactgcattgatctgtca 680
Query: 480 ctgttagtaaaaagtgagtgacaggaatgtttgcagtccttcagtctcagcattgtggga 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ctgttagtaaaaagtgagtgacaggaatgtttgcagtccttcagtctcagcattgtggga 740
Query: 540 ggatgaggagggagaaagatcagatttaggttagccttgtctacataatccatttaaggt 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ggatgaggagggagaaagatcagatttaggttagccttgtctacataatccatttaaggt 800
Query: 600 acaaactgagaccttatctaanaacaaaactatt 633
||||||||||||||||||||| ||||||||||||
Sbjct: 801 acaaactgagaccttatctaaaaacaaaactatt 834
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 636
Length of database: 1037
Length adjustment: 10
Effective length of query: 626
Effective length of database: 1027
Effective search space: 642902
Effective search space used: 642902
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no478_i03.g1 MSMg01no478_i03.g1 CHROMAT_FILE:
MSMg01no478_i03.g1 PHD_FILE: MSMg01no478_i03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:15 2005
(107 letters)
>mm_chr1_69046341_69046847
Length = 507
Score = 186 bits (96), Expect = 4e-52
Identities = 105/108 (97%), Gaps = 2/108 (1%)
Strand = Plus / Minus
Query: 1 tcttagggaaagatcaccttcc-aatagtagatgaacatccagtgttttaggtatttcta 59
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 307 tcttagggaaagatcaccttccaaatagtagatgaacatccagtgttttaggtatttcta 248
Query: 60 gatccacctcccaaggcatttaccctggctaaattgcatgtattaaat 107
||||||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 247 gatccacctccaaaggcatttaccctg-ctaaattgcatgtattaaat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 107
Length of database: 507
Length adjustment: 8
Effective length of query: 99
Effective length of database: 499
Effective search space: 49401
Effective search space used: 49401
X1: 6 (11.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 6 (12.4 bits)
S2: 6 (12.3 bits)
|
