GGTTTGCGACTCCTATATTCAGCAAATCCGCGGAATTCCTTCCTGTTCAG
TACAACTTCAATCCAGTCAGGGGACTGATTGTTCATCTCCACCAACATTT
TACTGTTATTGCACTGGTAGAAACATCTTTGCTGGTANGTCAATATTCAG
TATCCAGTACTGGGCAAGACTGTTGCTGTCTTTTCTCAACCAGCAGCCTG
CATAGCATCTTGTAACACCATGAAATAAGGCAGCAGGCAAAGTTTCTTGC
TTANTGAAAAACTAATCTTGATCCAAAAACCAAAAGGGGGGGGCCTTCCC
ATTTTTGTCTACGGGCCGGTGGAGGGAAACACCAAAGCCTTGGACAATAA
CCCCTTGTTTCCCGGGTCCTAGAAGCCCCTTGGGCAAAATTTTTAGGGAA
AAAATCCTCCCCCCCTAAAAAAAGAGGTTTGGGGACCAATATAAAAAAAA
AAAACCCCGTGGGAAAAAAAAATATTAAAAAAGTTTTTCCCCCCCCCTTT
TAAAAAAAAAAAAAAAGCCTTTTTTTTGGGGGGGGGTTCCCCCAAAAGAT
TTTTGTGGGGAAAAAAAAAAAAAAAAAAATCCCCCTCTATAAAAAAAAAA
AAAAAAAAGCGGCCTTTTTTTTTTTTTTGGGGGGGGGGGGCACACCATTC
TTTCTTCGCTTTTTTTTAAAAAAAAAAATATAAGGGGGCCTTTTTTCTCC
TTAATAAAAAAAAAAAAAAAAAACACCCCCCCTCCCTCTCTTTTTTTAAA
AAAAGAAAAAAAAG

GGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXCAACCATTGCACACTGGCAGAAATTATAAGAATTG
GGAATGTGGGAATGGGGATGCACTGTCTGTCCTCAAGTGGATCCCATGCA
CAGATGGTAATTAAAATGGATTCTGGAGTAGAATTTAATTCAACTCCAAC
AAGGTAAACTTCCCAGAATGCTTAGGAATAACTTTGGTGGGAGCAAGGGT
GCCTATGGCTGTAGCTTCTCTAACCTTATTTTTATGATTCATATTCACTA
AATTTGGCATTTCTCTGTCAGAATTCATGAATCATCAAAACACAGGTCTA
TCTAGTCAGTATGCAGATGGCTAACCATATTTTTTTACAGAACAGCTGTG
TCAGAATAACCGAATCAAGCAAAACTCAAGAGCATTTGTCTTCTCCAGGT
GTCATCAGTGGACAATTTTTTTTTTCTTTGCCAACATAAGTTTGGATTTG
AAGTCTTTAGAAGTCACACAAAGTACCCTTTAAAGTTCAAAGGACATTGT
GGTTATCTGCCCAAGACCTTTCCAAGATTAAGCTATCCAAAGATTCTGAC
AAAGAAGGTATAGATTGTCCCCAGGCCCCATACCTTATATGGGAACTAGG
GGCAGTGGCTACTTGCTGGGGAAGGAGAACTTACTCTTAATGGAGGAAGT
GGCTACTTAGTAGGCCTTCCATGTTCCAGTGTAACCACTGGATGCACTAC
ACCTGTGTG

Query= MSMg01no478_l23.g1 MSMg01no478_l23.g1 CHROMAT_FILE:
MSMg01no478_l23.g1 PHD_FILE: MSMg01no478_l23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:32 2005
         (664 letters)



>mm_chr1_24275661_24276722
          Length = 1062

 Score = 1174 bits (607), Expect = 0.0
 Identities = 650/665 (97%), Gaps = 4/665 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   caaccattgcacactggcagaaattataagaattgggaatgtgggaatggggatgcactg 60
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 201 caaccattgcacactggcagaaattataagaattgggaacgtgggaatggggatgcactg 260

                                                                       
Query: 61  tctgtcctcaagtggatcccatgcacagatggtaattaaaatggattctggagtagaatt 120
           ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||
Sbjct: 261 tctgtcctcaagtggatcccatgcacagatggttattaaaatggattcttgagtagaatt 320

                                                                       
Query: 121 taattcaactccaacaaggtaaacttcccagaatgcttaggaataactttggtgggagca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taattcaactccaacaaggtaaacttcccagaatgcttaggaataactttggtgggagca 380

                                                                       
Query: 181 agggtgcctatggctgtagcttctctaaccttatttttatgattcatattcactaaattt 240
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agggtgcctgtggctgtagcttctctaaccttatttttatgattcatattcactaaattt 440

                                                                       
Query: 241 ggcatttctctgtcagaattcatgaatcatcaaaacacaggtctatctagtcagtatgca 300
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 441 ggcatttctctgtcagaattcatgaatcatctaaacacaggtctatctagtcagtatgca 500

                                                                       
Query: 301 gatggctaaccatatttttttacagaacagctgtgtcagaataaccgaatcaagcaaaac 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gatggctaaccatatttttttacagaacagctgtgtcagaataaccgaatcaagcaaaac 560

                                                                       
Query: 361 tcaagagcatttgtcttctccaggtgtcatcagtggacaattttttttttctttgccaac 420
           |||||||||||||||||||||||||||||| ||||| |||||||||||  ||||||||||
Sbjct: 561 tcaagagcatttgtcttctccaggtgtcataagtggccaatttttttt--ctttgccaac 618

                                                                       
Query: 421 ataagtttggatttgaagtctttagaagtcacacaaagtaccctttaaagttcaaaggac 480
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 619 ataagtttggatttgaagtctttacaagtcacacaaagtaccctttaaagttcaaaggac 678

                                                                       
Query: 481 attgtggttatctgcccaagacctttccaagattaagctatccaaagattctgacaaaga 540
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 679 attgtggttatctgcccaagaccttaccaagattaagctatccaaagattctgacaaaga 738

                                                                       
Query: 541 aggtatagattgtccccaggccccataccttatatgggaactaggggcagtggcta-ctt 599
           |||| ||||||| |||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 739 aggtgtagattgcccccaggccccataccttatatgggaactaggggcagtgg-tatctt 797

                                                                       
Query: 600 gctggggaaggagaacttactcttaatggaggaagtggctacttagtaggccttccatgt 659
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 798 gctggggaaggagaacttactcttaatggaggaagtggctacttagtaggccttccatgt 857

                
Query: 660 tccag 664
           |||||
Sbjct: 858 tccag 862


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 664
Length of database: 1062
Length adjustment: 10
Effective length of query: 654
Effective length of database: 1052
Effective search space:   688008
Effective search space used:   688008
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)