GGGGCCTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCTCAATTGATGAAACATAGCTTAGAGGCAATTAAATGAGC
AACATCCTTAGTCATCAGAGAAATGCAAATCAAAACTGCTTTGGGATTTT
ATTTTACACCAATCAGAATGACCAAGATCAATAAAACAAATGACAGCTTA
CTGTTGTGAAGATGTGGAGAAAGAACACTCATCACTGATGGGAATGCAAA
CTTGTGTAGCCACTGTCCTCAAGGTCCAGCTGTACCACTTTTGGGCATAT
ACCCAAAGGTGTCTATGTTCTCCTACAGAGAAATTTACTCAGCCATGTTC
ATTGTTCCTCTAGTCATAATAGACAGAAATTGGAAATAGCCCAGATTCCC
ATCTATGGAAGAGTAGATAAAGAAAATGTCATACATTTACTTAGTAGAAT
GTTACTCAGCTTTTGGAAAATAAAATCATGAAATTCATAGGTAAATGGAT
GGAGCTAGAAACAAAATCATCCTGGGTAAGTTAATTCAGATTCTAAAAGA
CAATTATGTATATATTTGCTTTGACATGGATGTTAACTGTTAGGTCTTTG
ATAAGCAGGCTACATAATAGTCTTAAGGAGTAAGGGCCTGGGGGAAATAG
AGCAGATAGTCATGGGTTATCGGGGGTGTGAGAGCAGGACTAGAATGGGA
AGATCAAATGAAGAGAGGGAAGGAAGGATAANNGGAGGACAGCTAANATT
A

NNNTTCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCATACTCCAGTGCCAGATT
TGTCCAAACACAACCCTGCGCTGACCTGTTTACAGATTCATTCACAGACT
ACTATCGGCACTCCTTAGTTTGACATTTAAGAACTTAAGAGAACTGAGCT
AAAAATATTTATTCTCATAACTTTAAAAGGCATGTTCCCCAGACTTTTGG
CTTTTAATAATTTTACCAAAAATTAGAATGCTGTCTCATTTCACTACCAT
GTTCCCTATGCCCAATATTTTGTATGCAACCTACTACTTTCTTTCTAGAA
GCATTTTAAACATAGAAAACAACCCCCCTTGCAACCATGGTGACCTGATA
TTTTGTGATTTACAAACTGATATGCTTCTGTTCAGGGGGTCTTTACCATT
TACACTACTAGAGATTGGGTGGTCTCTCCAGTCTGGACATTTGTTTTCTT
GTCTGGGGACATTTTCTTGTATTATTCCTTTGATAATTGCCTCCCTAAAG
TCTTTGTTCCTTTTTACATAATATTGCTCATAGAATCTTTCATTCTTCAT
ATTATTTATTGCTGCATAGGTAGGTATGGAAGTCAGAAGACCACTTGTAG
AAGTGTGTTCTGTCTTCCCATCATGGATGCTCTAGGGATGAAACCAGGAC
CTGTGGGAAAGTGCCCTCACTGGCTTCTGCCATCAGAGTCT

Query= MSMg01no479_c04.g1 MSMg01no479_c04.g1 CHROMAT_FILE:
MSMg01no479_c04.g1 PHD_FILE: MSMg01no479_c04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:59:01 2005
         (646 letters)



>mm_chr1_159115421_159116466
          Length = 1046

 Score = 1203 bits (622), Expect = 0.0
 Identities = 641/648 (98%), Gaps = 2/648 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   catactc--cagtgccagatttgtccaaacacaaccctgcgctgacctgtttacagattc 58
           |||||||  ||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 199 catactccacagtgccagatttgtccaaccacaaccctgcgctgacctgtttacagattc 258

                                                                       
Query: 59  attcacagactactatcggcactccttagtttgacatttaagaacttaagagaactgagc 118
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 attcacagactactatcggcactccttagtttgacatttaagaacttaagagaactgagc 318

                                                                       
Query: 119 taaaaatatttattctcataactttaaaaggcatgttccccagacttttggcttttaata 178
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 taaaaatatttatcctcataactttaaaaggcatgttccccagacttttggcttttaata 378

                                                                       
Query: 179 attttaccaaaaattagaatgctgtctcatttcactaccatgttccctatgcccaatatt 238
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 attttaccaaaaattagaatgctgtctcatttcactaccatgttccctatgcccaatatt 438

                                                                       
Query: 239 ttgtatgcaacctactactttctttctagaagcattttaaacatagaaaacaacccccct 298
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 ttgtatgcaacctactacattctttctagaagcattttaaacatagaaaacaacccccct 498

                                                                       
Query: 299 tgcaaccatggtgacctgatattttgtgatttacaaactgatatgcttctgttcaggggg 358
            ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 cgcaaccatggttacctgatattttgtgatttacaaactgatatgcttctgttcaggggg 558

                                                                       
Query: 359 tctttaccatttacactactagagattgggtggtctctccagtctggacatttgttttct 418
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 tctttaccatttacactactagagattgggtggtctctccagtctggacatttgttttct 618

                                                                       
Query: 419 tgtctggggacattttcttgtattattcctttgataattgcctccctaaagtctttgttc 478
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 tgtctggggacattttcttgtattattcctttgataattgcctccctaaagtctttgttc 678

                                                                       
Query: 479 ctttttacataatattgctcatagaatctttcattcttcatattatttattgctgcatag 538
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 ctttttacataatattgctcatagaatctttcattcttcatattatttattgctgcatag 738

                                                                       
Query: 539 gtaggtatggaagtcagaagaccacttgtagaagtgtgttctgtcttcccatcatggatg 598
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 gtaggtatggaagtcagaagaccacttgtagaagtgtgttctgtcttcccatcatggatg 798

                                                           
Query: 599 ctctagggatgaaaccaggacctgtgggaaagtgccctcactggcttc 646
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 ctctagggatgaaaccaggacctgtgggaaagtgccctcactggcttc 846


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 646
Length of database: 1046
Length adjustment: 10
Effective length of query: 636
Effective length of database: 1036
Effective search space:   658896
Effective search space used:   658896
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)