Query= MSMg01no480_b16.b1 MSMg01no480_b16.b1 CHROMAT_FILE:
MSMg01no480_b16.b1 PHD_FILE: MSMg01no480_b16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:00:18 2005
(572 letters)
>mm_chr1_190847130_190848101
Length = 972
Score = 1083 bits (560), Expect = 0.0
Identities = 569/572 (99%)
Strand = Plus / Plus
Query: 1 ggcaacattctttcaaaattgttttatatctacctttaacttattatattggatttttaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ggcaacattctttcaaaattgttttatatctacctttaacttattatattggatttttaa 260
Query: 61 ttaccacagaggggcagagtttgatggcattttcactccttccctcacccctgcaccatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttaccacagaggggcagagtttgatggcattttcactccttccctcacccctgcaccatc 320
Query: 121 tcccatgcctgtgccatgtgtgccccacccatcccaggcccctcccttttgctatttcat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcccatgcctgtgccatgtgtgccccacccatcccaggcccctcccttttgctatttcat 380
Query: 181 cacaagggtccctttccctttttctagcttagatgctaggatccacatacgagaaagaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cacaagggtccctttccctttttctagcttagatgctaggatccacatacgagaaagaat 440
Query: 241 atgctttttttgtctctctgagcccaagttggctcatgaatatacttttcaaacctcatg 300
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atgcagtttttgtctctctgagcccaagttggctcatgaatatacttttcaaacctcatg 500
Query: 301 gaataaaactagcaaggattaccaccccctcccaacataagcatgcacaaatacataaga 360
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 501 gaataaaactagcaaggattaccaccccctcccaacatacgcatgcacaaatacataaga 560
Query: 361 acttggagattgtcaatgcatttttgaatgaacactgggtgagtcattgaagaaattaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 acttggagattgtcaatgcatttttgaatgaacactgggtgagtcattgaagaaattaaa 620
Query: 421 gagaccaattaaacattcttagaatcaagtgggaatgaggtcactgcctaccagaaactc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gagaccaattaaacattcttagaatcaagtgggaatgaggtcactgcctaccagaaactc 680
Query: 481 tgggacacagccaaggcagtcaagaacaaagtttgtaactataaccacttttctcaaata 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tgggacacagccaaggcagtcaagaacaaagtttgtaactataaccacttttctcaaata 740
Query: 541 ttagagagctcaaatgtaaataaaccaatgag 572
||||||||||||||||||||||||||||||||
Sbjct: 741 ttagagagctcaaatgtaaataaaccaatgag 772
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 572
Length of database: 972
Length adjustment: 10
Effective length of query: 562
Effective length of database: 962
Effective search space: 540644
Effective search space used: 540644
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no480_b16.g1 MSMg01no480_b16.g1 CHROMAT_FILE:
MSMg01no480_b16.g1 PHD_FILE: MSMg01no480_b16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:00:19 2005
(406 letters)
>mm_chr1_191034375_191035180
Length = 806
Score = 572 bits (296), Expect = e-167
Identities = 352/385 (91%), Gaps = 24/385 (6%)
Strand = Plus / Minus
Query: 1 taagtggcaacacttctcagctctgaactctgggttgcatctcaagctaacagcagcaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 taagtggcaacacttctcagctctgaactctgggttgcatctcaagctaacagcagcaca 425
Query: 61 cctaccaagtcccacccaggtcacctaggctaacacctcattctcttcctcattcctgtt 120
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 424 cctaccaagtcccacccaggtcacctcggctaacacctcattctcttcctcattcctgtt 365
Query: 121 gcctctacaatggccctttctaagtctaagtccttgaagctacaggaagatgaaatcaat 180
||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||
Sbjct: 364 gcctctacaatggccctttctaagtctgagtccttgaagctacaggaagatgaaagcaat 305
Query: 181 aggtgacacctggaagattaaaggggagacattaacagatttccattttatagcatttga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 aggtgacacctggaagattaaaggggagacattaacagatttccattttatagcatttga 245
Query: 241 taggtcnttatgtctgcgtgcgtgcgcgtgcctgcgtgcctgcgtgtcggtgcgtgggtg 300
| ||| ||||||||||||||||||||||||||||||||||||| ||| ||||
Sbjct: 244 aatgtctttatgtctgcgtgcgtgcgcgtgcctgcgtgcctgcgcgtc--tgcg------ 193
Query: 301 cgtgggtgcgtgcgtgcgtgcgtgcgtacgtgcgtgcgtgcgtgcgtgtgtgcgtgcgtg 360
||||||||||||||||||| ||||||||||||||||||||| |||
Sbjct: 192 --------cgtgcgtgcgtgcgtgcgt--------gcgtgcgtgcgtgtgtgcgtgtgtg 149
Query: 361 tgtgtgtgtgtgtgtgtgtgtgtgt 385
||||||||||||||||||| |||||
Sbjct: 148 tgtgtgtgtgtgtgtgtgtttgtgt 124
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 406
Length of database: 806
Length adjustment: 9
Effective length of query: 397
Effective length of database: 797
Effective search space: 316409
Effective search space used: 316409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
