Query= MSMg01no481_f15.b1 MSMg01no481_f15.b1 CHROMAT_FILE:
MSMg01no481_f15.b1 PHD_FILE: MSMg01no481_f15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:01:58 2005
(513 letters)
>mm_chr1_120731776_120732689
Length = 914
Score = 932 bits (482), Expect = 0.0
Identities = 506/514 (98%), Gaps = 1/514 (0%)
Strand = Plus / Minus
Query: 1 ccacaccccggaattccttgacactgccctccatccctgcgggcatcagcaacatggccg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714 ccacaccccggaattccttgacactgccctccatccctgcgggcatcagcaacatggccg 655
Query: 61 tgggtgacatgagttccatgctcaccagcctggctgaagagagcaagtttttaaacatga 120
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 tgggcgacatgagttccatgctcaccagcctggctgaagagagcaagtttttaaacatga 595
Query: 121 tgacctaaaggccctggctcctggcacaggagacctgagcaacactagccccttggaata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 tgacctaaaggccctggctcctggcacaggagacctgagcaacactagccccttggaata 535
Query: 181 tgagggtctagtctgttttcattgtcccaaagtgttaactaggcctgagaggggttgggc 240
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 tgagggtctagtctgttctcattgtcccaaagtgttaactaggcctgagaggggttgggc 475
Query: 241 aatggccaactccaaatgacagctctgggccatgcccaggggtcttcttgcagatgtttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 aatggccaactccaaatgacagctctgggccatgcccaggggtcttcttgcagatgtttt 415
Query: 301 aagaaaagattaaggggcatcctctctgctgtttggcctatatgggggag-aggggtcac 359
||||||||||||||||||||||||||||||||||||||||| |||||| | ||||| |||
Sbjct: 414 aagaaaagattaaggggcatcctctctgctgtttggcctatttggggggggaggggacac 355
Query: 360 ccaaagtcttattcaaaaagaaactcgttcacatgacgcttgccagcctctggtgtttgt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 ccaaagtcttattcaaaaagaaactcgttcacatgacgcttgccagcctctggtgtttgt 295
Query: 420 gagattcccaggttctggctcctttgcctctatcattcagctaatgagagagaactttgg 479
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 gagattcccgggttctggctcctttgcctctatcattcagctaatgagagagaactttgg 235
Query: 480 ccaagggctttccaagtacacgcccaaagagggg 513
||| ||||||||||||||||||||||||||||||
Sbjct: 234 ccaggggctttccaagtacacgcccaaagagggg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 513
Length of database: 914
Length adjustment: 10
Effective length of query: 503
Effective length of database: 904
Effective search space: 454712
Effective search space used: 454712
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no481_f15.g1 MSMg01no481_f15.g1 CHROMAT_FILE:
MSMg01no481_f15.g1 PHD_FILE: MSMg01no481_f15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:01:58 2005
(347 letters)
>mm_chr1_120554826_120555572
Length = 747
Score = 648 bits (335), Expect = 0.0
Identities = 344/347 (99%)
Strand = Plus / Plus
Query: 1 gccatgagaggcacaatgaaggtgacacaggagtgagggagggagggactgtaccctcag 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 201 gccatgagaggcacaatgaaggtgacacaggagtgagtgagggagggactgtaccctcag 260
Query: 61 gtctctcctcctaacaaaccctgagcctctagtttgtgaagaagagagatgatggtggct 120
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtctctcctcccaacaaaccctgagcctctagtttgtgaagaagagagatgatggtggct 320
Query: 121 ctgaggctggcactcgctggcactatctgtgactagaaatagattctgcagcctgttgca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctgaggctggcactcgctggcactatctgtgactagaaatagattctgcagcctgttgca 380
Query: 181 tcatcatttagctacagcagagacggatgcctttggggctgcgatgttgagggctgggtg 240
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcatcatttagccacagcagagacggatgcctttggggctgcgatgttgagggctgggtg 440
Query: 241 tgctgggcctgagcagagttgaacaaggcacagtgtgggtcagaatccactctcctacct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgctgggcctgagcagagttgaacaaggcacagtgtgggtcagaatccactctcctacct 500
Query: 301 ttctgtggtctccatcagtcgccccagcactgatatatcctgtcttg 347
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttctgtggtctccatcagtcgccccagcactgatatatcctgtcttg 547
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 347
Length of database: 747
Length adjustment: 9
Effective length of query: 338
Effective length of database: 738
Effective search space: 249444
Effective search space used: 249444
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|