Query= MSMg01no483_e11.b1 MSMg01no483_e11.b1 CHROMAT_FILE:
MSMg01no483_e11.b1 PHD_FILE: MSMg01no483_e11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:04:26 2005
(616 letters)
>mm_chr1_168855367_168856382
Length = 1016
Score = 1102 bits (570), Expect = 0.0
Identities = 603/614 (98%), Gaps = 2/614 (0%)
Strand = Plus / Plus
Query: 4 ggaattctcacatcccccattagaagggaagaagaaggcactctagaagcagaaaattgg 63
|||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctcacaactcccattagaagggaagaagaaggcactctagaagcagaaaattgg 263
Query: 64 cagactgagtccttctagccccagagtctggagagctggaagacacaggctgagtgtggg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 cagactgagtccttctagccccagagtctggagagctggaagacacaggctgagtgtggg 323
Query: 124 gaggggaaacttgtgccacccgatttcctgctctctcttctctgagtctcaagagtggct 183
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gaggggaaacttgtgccacctgatttcctgctctctcttctctgagtctcaagagtggct 383
Query: 184 caagaagagctccgacagtaaaggtggggatggaaattgaggaaggcattgcttgttacc 243
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 caagaggagctccgacagtaaaggtggggatggaaattgaggaaggcattgcttgttacc 443
Query: 244 atgctagaaatcagagacctggaggcc-tgttacatagcttgcttactggttactccatg 302
||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 444 atgctagaaatcagagacctggaggccctga-acatagcttgcttactggttactccatg 502
Query: 303 tgtccatccatttccaagcacacttatattctctgagagaaactaaacttcctgccagga 362
||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 tgtccatccttttcctagcacacttatattctctgagagaaactaaacttcctgccagga 562
Query: 363 gtactcagaggagcataggaaactaatgcttgcctctactttggaaaccaaaggtttggg 422
|||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 563 gtactcggaggagcataggaaactaatgcttgcctctagtttggaaaccaaaggtttggg 622
Query: 423 gactctccaccattgctgctatacagtgacataactgatgtattctctaccaggaatttg 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 gactctccaccattgctgctatacagtgacataactgatgtattctctaccaggaatttg 682
Query: 483 aatcttaaataaacaatagaagggcaaacaaatctgagtagcatcccagtagtgacatga 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 aatcttaaataaacaatagaagggcaaacaaatctgagtagcatcccagtagtgacatga 742
Query: 543 ccctgaccagaaggcccctactgcacaaccagtcctgaccgtccatccctgagcctctgg 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 ccctgaccagaaggcccctactgcacaaccagtcctgaccgtccatccctgagcctctgg 802
Query: 603 acatgctgggtcct 616
||||||||||||||
Sbjct: 803 acatgctgggtcct 816
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 616
Length of database: 1016
Length adjustment: 10
Effective length of query: 606
Effective length of database: 1006
Effective search space: 609636
Effective search space used: 609636
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no483_e11.g1 MSMg01no483_e11.g1 CHROMAT_FILE:
MSMg01no483_e11.g1 PHD_FILE: MSMg01no483_e11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:04:26 2005
(617 letters)
>mm_chr1_169047433_169048449
Length = 1017
Score = 752 bits (389), Expect = 0.0
Identities = 416/425 (97%)
Strand = Plus / Minus
Query: 193 cagatggtcctgagctatctaagaaagctagctaagcctgagctttcgattgatccagca 252
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1017 cagatggtcctgagctatctaagaaagctagctaagcctgagctttcgattgagccagca 958
Query: 253 aacaccattccttcatatagtttttgcttcaagttcatgcttgaattcctgccctgactc 312
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 957 agcaccattccttcatatagtttttgcttcaagttcatgcttgaattcctgccctgactc 898
Query: 313 acctcaatgatggacggtaacctggaagtaataagcaaacaaattctttccttaccagtc 372
||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||
Sbjct: 897 acctcaatgatggacggtaacctggaagtaataagcaaataaatcctttccttaccagtc 838
Query: 373 agagtgttttatcagagcaaagtaatgaaattagtgagtttccattagtaatggagcaca 432
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 837 agagtgttttatcagagcaaagtaatgaaattagtgagtttccattagtaatggagcata 778
Query: 433 tctcagggtctactatgcatcatttcgacgagaaaaggagggagagacagggagacacca 492
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 777 tctcagggtctactatgcatcatttagacgagaaaaggagggagagacagggagacacca 718
Query: 493 aattggctctagatgttttatttcttccctttaactttctgctaggccttcagcacaagg 552
||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||
Sbjct: 717 aattggctctagatgttttatttcttcccttcaactttctgctaagccttcagcacaagg 658
Query: 553 attgagtcctgtgacgccccaggtttcatggttgtacaatcagctctggacggggtattt 612
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 657 attgagtcctgtgacgccccaggtttcatggttgtacaatcagctctggacagggtattt 598
Query: 613 cttag 617
|||||
Sbjct: 597 cttag 593
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 617
Length of database: 1017
Length adjustment: 10
Effective length of query: 607
Effective length of database: 1007
Effective search space: 611249
Effective search space used: 611249
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
