Query= MSMg01no483_k23.b1 MSMg01no483_k23.b1 CHROMAT_FILE:
MSMg01no483_k23.b1 PHD_FILE: MSMg01no483_k23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:04:58 2005
(592 letters)
>mm_chr1_196665231_196666222
Length = 992
Score = 1102 bits (570), Expect = 0.0
Identities = 584/592 (98%), Gaps = 7/592 (1%)
Strand = Plus / Minus
Query: 5 gaattcttaaattttcaaa----atattatcaaggtaattttggcaatgtgatgaagcag 60
||||||||||||| ||| |||||||||||||||||||||||||||||||||||||
Sbjct: 812 gaattcttaaatt---aaaagatatattatcaaggtaattttggcaatgtgatgaagcag 756
Query: 61 tgggagaggagataagacgaaggattcctgggaccagaacaaactggggaaatcttatct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 755 tgggagaggagataagacgaaggattcctgggaccagaacaaactggggaaatcttatct 696
Query: 121 atacttagctaacaccacacatccctttgcttcccccaccccccacttccagatgcccac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 atacttagctaacaccacacatccctttgcttcccccaccccccacttccagatgcccac 636
Query: 181 agtgtagcatcactgcaggggctgaagagacacattatttcctttgaatattaaggtttg 240
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 635 agtgtagcatcactgcaggggctgaagagacacattatttcccttgaatattaaggtttg 576
Query: 241 aactactttgagcaagggatacctcaacaaagaagattcagagaaataaaggagagaatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 aactactttgagcaagggatacctcaacaaagaagattcagagaaataaaggagagaatc 516
Query: 301 aagaaggaaacatcaaatttgacaaagagagaatgagagagaaaatacagaaattgcagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 aagaaggaaacatcaaatttgacaaagagagaatgagagagaaaatacagaaattgcagt 456
Query: 361 ctgttatttgtataatgccagttggcagacactgtcatctggatggtgccctctgctgat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 ctgttatttgtataatgccagttggcagacactgtcatctggatggtgccctctgctgat 396
Query: 421 cacttttataatttcaacaccacacactgagatgtcctcagtggatgcactcatccaata 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 cacttttataatttcaacaccacacactgagatgtcctcagtggatgcactcatccaata 336
Query: 481 ccagtagtaaagcagagtttagtacttacaccctgtgctaagtcttaagactgtgacatg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 ccagtagtaaagcagagtttagtacttacaccctgtgctaagtcttaagactgtgacatg 276
Query: 541 tattaatcctaataagaagcaaaatgatgaaaatgagtcccaggcatcttac 592
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 tattaatcctaataagaagcaaaatgatgaaaatgagtcccaggcatcttac 224
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 592
Length of database: 992
Length adjustment: 10
Effective length of query: 582
Effective length of database: 982
Effective search space: 571524
Effective search space used: 571524
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no483_k23.g1 MSMg01no483_k23.g1 CHROMAT_FILE:
MSMg01no483_k23.g1 PHD_FILE: MSMg01no483_k23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:04:59 2005
(562 letters)
>mm_chr1_196615306_196616267
Length = 962
Score = 1056 bits (546), Expect = 0.0
Identities = 558/562 (99%)
Strand = Plus / Plus
Query: 1 ccatggattaagccccagtctgcccagtgttacctacctgaaagctttgcactataaact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccatggattaagccccagtctgcccagtgttacctacctgaaagctttgcactataaact 260
Query: 61 ctaccagaataagccttctgtttttatcacaacagaggacaggaatatgtattgacaacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctaccagaataagccttctgtttttatcacaacagaggacaggaatatgtattgacaacc 320
Query: 121 tgactggaccctaagcattgattagtcatattctagaaaaaaaggatttctcaaaaatct 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 321 tgactggaccctaagcattgattagtcatattctagaaaaaaaggatttctcaaaactct 380
Query: 181 catagagccttgtctctgcccatattctttaaactttctactgtgctcccttcctcatct 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 catagagccttgtctctgcccatattctttaaactttctactgtgctcccttcctcatcc 440
Query: 241 agcgaaggtaaagtgaaggtgctgatggacactggtagaagatatttctgtagcacataa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 441 agcgaaggtaaagtgaaggtgctgatggacactggtagaagatatttctgtagcacaaaa 500
Query: 301 aagaagacagcagaatgtatcatgggccatacatagtggaagggtcatgcctttcaagct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aagaagacagcagaatgtatcatgggccatacatagtggaagggtcatgcctttcaagct 560
Query: 361 agttcatgcccatatcttttgtcttaacccttctctgtttctccatcaggaggtcaatga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agttcatgcccatatcttttgtcttaacccttctctgtttctccatcaggaggtcaatga 620
Query: 421 atgagattgtatgtgtttcacccccatcatccaatggactaggaccagtccctgtctccg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atgagattgtatgtgtttcacccccatcatccaatggactaggaccagtccctgtctccg 680
Query: 481 tgagtgtcgacagagcccgggtggacagcagtctgcagttcgagtatatagatgacccac 540
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 681 tgagtgtcgacagagcccgggtggatagcagtctgcagttcgagtatatagatgacccac 740
Query: 541 gggtccaacgtattgagccaga 562
||||||||||||||||||||||
Sbjct: 741 gggtccaacgtattgagccaga 762
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 562
Length of database: 962
Length adjustment: 10
Effective length of query: 552
Effective length of database: 952
Effective search space: 525504
Effective search space used: 525504
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|