NACTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGCGC
GGAATTCCCCTGTTTGCCTTTTTTTTTTTCACTAGGCCCAGAGGAATAGC
ATAATCAAGTATTTACTAAAGGACCCCTTGTGGTGGGTTTAACAATAGAC
TAGCATTGTATCAGAGCATTCACCTGGTTCCTGTGTTTATCTGATCTTAA
CTAGTGTTGTTCCTATTCTCAGTTGTAACCATGGCCTGGGTTCTACCATC
ATTTAATGTATTCATTCTTTTTTTTTTTTTTTTTTTTTTTTTGTCAGGGT
AACTTGGCTGATGTGCTTTTTTTGCTTTCTTGTTTTTTCTTCTGGATTAA
AACCCTGGTGTTTGCTTGGAAAAAATTACATTCAGATTCAGGACTCCTTT
GTCTCTGTGTCTGTCTGTCAATTCTTGCCAACTCTTTAGCCATCTGTATG
AAACCCTGATTTCCCACGGATTGAGAGAGGCCAACTGGGCCGATCCGTGA
CAGTCAGATAAAGCAAGAGCAATGGAATGTTTGGTTTAATGCTAAATATA
TGTTACCTTTTAAATATATGCTGCTTACAGGTAATGAGTGTTATGTTACT
TACCTTTCCTCTTCATGTATTGAAACATACCGAAAGAAGCAACTTGAGTA
AGAAAGAGGGCTTATTTTAACTCAGAGTATGAGGTTACAATTTCTTGCAT
CTGGGAAGTCACAGGAGCGGTAAGATAATTTAGC

CAATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTCCTACTCTGCATTCAAGAGTAAAAG
ACAATAAAAACAGGTTCAAGATGACTGAATCAGATAGTGCAGGAGCAGGT
GGATTTTGATACAAGATCACACTTGTGAATAGTTGGTCTGAATATTGATT
GCTGTATTTATAATTAAGTTGCAACTTTATATTAAAATTTCTGTTCAGAT
CAGGAGATAAAGCCAGGTTGCTTGAGTTCTGGCCTAGAAGTACACAAAGT
CAAGGTTGCTCCCAATACCACATAAACAGGGCATCATGGTTCATGCCTAT
AGTCTTGGCATTCAAGAGATAAAGGCAAGAAAATTAGATGTCCAAAGCCA
TCAATGGATATGCAGGAAGTTAGATGCCAAATTTGATTATGTTAAGCACT
CTCTCAAAATTTTTTTCAATACTTTAAAGAAGATATGACAAAGATTGAAA
GAGTGATAACAAAGAGTTGAGAATATGCCCATGTATTTCATGGTATACAT
TTGTGTAAGTGATATATATATATATATATATATATATATATACATATATA
TATATATATATATATATATATACACATATACATGCATGTGTGTGCACATA
CATTATTCTGTACCTGAATACTAACAGAGTGTTTAACACACAAGTATACT
TGAATCAATATTTTGAATACTTTAGAACCTTAAACCACAAGGCTTGCTTT
GAATCGCTATTTATCT

Query= MSMg01no484_i20.g1 MSMg01no484_i20.g1 CHROMAT_FILE:
MSMg01no484_i20.g1 PHD_FILE: MSMg01no484_i20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:06:10 2005
         (646 letters)



>mm_chr1_103905793_103906838
          Length = 1046

 Score =  708 bits (366), Expect = 0.0
 Identities = 422/442 (95%), Gaps = 5/442 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   tcctactctgcattcaagagtaaaagacaataaaaacaggttcaagatgactgaatcaga 60
           ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 201 tcctactctgcattcaagagtaaaagacaataataataggttcaagatgactgaatcaga 260

                                                                       
Query: 61  tagtgcaggagcaggtggattttgatacaagatcacacttgtgaatagttggtctgaata 120
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 261 tagtgaaggagcaggtggattttgatacaagatcacacttgtgaatagttggtctgaatg 320

                                                                       
Query: 121 ttgattgctgtatttataattaagttgcaactttatattaaaatttctgttcagatcagg 180
           ||||| |||||||||||||||||||||||| |||||||||||||||||||||||| ||||
Sbjct: 321 ttgatagctgtatttataattaagttgcaattttatattaaaatttctgttcagaccagg 380

                                                                       
Query: 181 agataaagccaggttgcttgagttctggcctagaagtacacaaagtcaaggttgctccca 240
           |||||||||||||||| | |||||||| ||||||||||||||||||||||||||||||||
Sbjct: 381 agataaagccaggttggtagagttctgtcctagaagtacacaaagtcaaggttgctccca 440

                                                                       
Query: 241 ataccacataaacagggcatcatggttcatgcctatagtcttggcattcaagagataaag 300
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 441 ataccacataaacagggcatcatgcttcatgcctatagtcttggcattcaagagataaag 500

                                                                       
Query: 301 gcaagaaaattagatgtccaaa--gccatcaatggatatgcaggaagttagatgccaaat 358
           |||||| | ||||||||  |||  ||||||||||||||||||||||||||||||||| ||
Sbjct: 501 gcaagagatttagatgt--aaaaggccatcaatggatatgcaggaagttagatgccagat 558

                                                                       
Query: 359 ttgattatgttaagcactctctcaaaatttttttcaatactttaaagaagatatgacaaa 418
           |||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||
Sbjct: 559 ttgattatgttaagcactctctcaaaatatttt-caatactttaaagaagatatgacaaa 617

                                 
Query: 419 gattgaaagagtgataacaaag 440
           ||||||||||||||||||||||
Sbjct: 618 gattgaaagagtgataacaaag 639


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 646
Length of database: 1046
Length adjustment: 10
Effective length of query: 636
Effective length of database: 1036
Effective search space:   658896
Effective search space used:   658896
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)