Query= MSMg01no485_g23.b1 MSMg01no485_g23.b1 CHROMAT_FILE:
MSMg01no485_g23.b1 PHD_FILE: MSMg01no485_g23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:07:23 2005
(448 letters)
>mm_chr1_169445173_169446020
Length = 848
Score = 828 bits (428), Expect = 0.0
Identities = 440/444 (99%)
Strand = Plus / Plus
Query: 5 gaattcctgatgtttccaagacttttatcatgaatgggtgttggattttttcaaatgctt 64
||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 205 gaattcctgatctttccaagacttttatcatgaatgtgtgttggattttttcaaatgctt 264
Query: 65 tggagaaaacattttgatttacctgtccaggcaccagcctatgagatgcctgcttatgta 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tggagaaaacattttgatttacctgtccaggcaccagcctatgagatgcctgcttatgta 324
Query: 125 agctgaaaacaaagcaggctccttctgggtcagatcacctgctgacagccatatcaaacc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 agctgaaaacaaagcaggctccttctgggtcagatcacctgctgacagccatatcaaacc 384
Query: 185 aacagtgttgaccaagctccaccactggggtctagggcttcccagagatacagggtggca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aacagtgttgaccaagctccaccactggggtctagggcttcccagagatacagggtggca 444
Query: 245 cggttggcactatagctcgtctacctggcagtgttctctgttagccccaacctgcagaac 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 cggttggcactatagctcgtctacctggcagtgttctctgttagccccaacctgcagaac 504
Query: 305 cctggcatgactgaagtcaagaatgtactcatttataaaccatgtttcctagttccttac 364
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 cctggcaggactgaagtcaagaatgtactcatttataaaccatgtttcctagttccttac 564
Query: 365 acccatctgtactcttgtctactctgaccactgaaagctaaatacaatgtctctgtgggt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 565 acccatctgtactcttgtctactctgaccactgaaagctaaatacaatgtctccgtgggt 624
Query: 425 cttctgtggaggcttgctgaagag 448
||||||||||||||||||||||||
Sbjct: 625 cttctgtggaggcttgctgaagag 648
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 448
Length of database: 848
Length adjustment: 10
Effective length of query: 438
Effective length of database: 838
Effective search space: 367044
Effective search space used: 367044
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no485_g23.g1 MSMg01no485_g23.g1 CHROMAT_FILE:
MSMg01no485_g23.g1 PHD_FILE: MSMg01no485_g23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:07:23 2005
(423 letters)
>mm_chr1_169619583_169620403
Length = 821
Score = 799 bits (413), Expect = 0.0
Identities = 420/423 (99%), Gaps = 2/423 (0%)
Strand = Plus / Minus
Query: 1 tgttgaactcgtgaagcctggggaggcttgatggttgtatttaggtagggacgactcaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tgttgaactcgtgaagcctggggaggcttgatggttgtatttaggtagggacgactcaaa 562
Query: 61 aggactgatggacacggaaagacagagattgtgggcacctctgtgtgcgcgcgcgaagag 120
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 561 aggactgatggacacggaaagacagagattgtgggcacctctgtgt--gcgcgcgaagag 504
Query: 121 ggtgctagtctggtcgcttaacccagtatcagagacctgacgtcctgagctcccggcccc 180
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 503 ggtgctagtctggtcgcttaacccagtatcagagacctgacgtactgagctcccggcccc 444
Query: 181 ggcagaaggaggatgctctagggagcatgcggttgaacacttacccagcaaagaggagaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 ggcagaaggaggatgctctagggagcatgcggttgaacacttacccagcaaagaggagaa 384
Query: 241 agatgccgaggtctcaatcgcactttgaaagttctcctccatcttcaggccgtccaacat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 agatgccgaggtctcaatcgcactttgaaagttctcctccatcttcaggccgtccaacat 324
Query: 301 gttcggggtgagccaggaggacctgtagagcggaggaacggttgagtctagcttcccgtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 gttcggggtgagccaggaggacctgtagagcggaggaacggttgagtctagcttcccgtg 264
Query: 361 cctgttgggactccgcaccctcagttgccactctcctgggacaggacagaagcagtgtcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 cctgttgggactccgcaccctcagttgccactctcctgggacaggacagaagcagtgtcc 204
Query: 421 agg 423
|||
Sbjct: 203 agg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 423
Length of database: 821
Length adjustment: 9
Effective length of query: 414
Effective length of database: 812
Effective search space: 336168
Effective search space used: 336168
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
