Query= MSMg01no485_j06.b1 MSMg01no485_j06.b1 CHROMAT_FILE:
MSMg01no485_j06.b1 PHD_FILE: MSMg01no485_j06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:07:34 2005
(642 letters)
>mm_chr1_4710991_4712032
Length = 1042
Score = 1166 bits (603), Expect = 0.0
Identities = 630/639 (98%), Gaps = 2/639 (0%)
Strand = Plus / Minus
Query: 5 gaattgtagctaaattccaagactcatatttgataataaactaaagaaattcatctttta 64
|||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 842 gaattgtagctaaaaacaaagactcatatttgataataaactaaagaaattcatctttta 783
Query: 65 aaaatctttgtttaactagcgttttcttggaaggacaacttattttataactctggatgg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 aaaatctttgtttaactagcgttttcttggaaggacaacttattttataactctggatgg 723
Query: 125 tagttgatcgagtgcattttgccccactgttgcaaaccatattatttatggcatattctt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 tagttgatcgagtgcattttgccccactgttgcaaaccatattatttatggcatattctt 663
Query: 185 agtgatgaccaaactggggtctcagcctgacctgcagggccctcggaatgtacagtgaag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 agtgatgaccaaactggggtctcagcctgacctgcagggccctcggaatgtacagtgaag 603
Query: 245 gctccaagactaggatcactttttctacttcctgtgaagttacaaggaatgaggtgaaaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 gctccaagactaggatcactttttctacttcctgtgaagttacaaggaatgaggtgaaaa 543
Query: 305 acacaagttagtctattcctgaaaatgccttccaagcatgatctctagctacctgagcat 364
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 542 acacaagttagtctattcctgaaaatgccttccaagcatgatctctagctgcctgagcat 483
Query: 365 cagatattcatccctcatggaagggccaatgatgatataaatgataactgaaatgcccat 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 cagatattcatccctcatggaagggccaatgatgatataaatgataactgaaatgcccat 423
Query: 425 gtcgggcagtaaagtttcctcagctctgggctctaaaggttcattcttcctgttacagca 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 gtcgggcagtaaagtttcctcagctctgggctctaaaggttcattcttcctgttacagca 363
Query: 485 actattgagtctaaaatgtgcttagtaggagcccaggcaat-gggaagggtcatcatcat 543
||||||||||||||||||||||||||| |||||||||| || || |||||||||||||||
Sbjct: 362 actattgagtctaaaatgtgcttagtacgagcccaggc-atcggaaagggtcatcatcat 304
Query: 544 ggtgcaggtgcttgctctttcagtacattacatgtatttttttcattcaattgtcacaat 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 ggtgcaggtgcttgctctttcagtacattacatgtatttttttcattcaattgtcacaat 244
Query: 604 ttagttacctccctcttatgctgaaaagacacattgaga 642
||||||| |||||||||||||||||||||||||||||||
Sbjct: 243 ttagttatctccctcttatgctgaaaagacacattgaga 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 642
Length of database: 1042
Length adjustment: 10
Effective length of query: 632
Effective length of database: 1032
Effective search space: 652224
Effective search space used: 652224
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no485_j06.g1 MSMg01no485_j06.g1 CHROMAT_FILE:
MSMg01no485_j06.g1 PHD_FILE: MSMg01no485_j06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:07:34 2005
(651 letters)
>mm_chr1_4662934_4663984
Length = 1051
Score = 1243 bits (643), Expect = 0.0
Identities = 649/651 (99%)
Strand = Plus / Plus
Query: 1 tcctgggggagctatgtctacttattctaggaggggcagtaatgacataccaaaggaatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcctgggggagctatgtctacttattctaggaggggcagtaatgacataccaaaggaatc 260
Query: 61 gttctacccaagtctacctcgaggaaccaatggcttattggacttactggtagacttaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gttctacccaagtctacctcgaggaaccaatggcttattggacttactggtagacttaaa 320
Query: 121 tgaaaactgcggtttttaaaggtaatagaccctgggggaaaaaattctccctaaatttct 180
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 321 tgaaaactgcggtttttaaaggtaatagaccctggggggaaaaattctccctaaatttct 380
Query: 181 atcaagatttttttctccatcagttttattggggtcattatttcaaggttcattaaacgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atcaagatttttttctccatcagttttattggggtcattatttcaaggttcattaaacgt 440
Query: 241 aaagcagaagtaacacatatttctgttagttacaaacttggatgaaaaagttttatatta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaagcagaagtaacacatatttctgttagttacaaacttggatgaaaaagttttatatta 500
Query: 301 ctttctcctatccatattcatggaaaatgtgtaataaatggtaaacttataatgttagtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctttctcctatccatattcatggaaaatgtgtaataaatggtaaacttataatgttagtt 560
Query: 361 atatttctggtgatttattctttaggaataagccatgtacttattaagcaactttgtaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atatttctggtgatttattctttaggaataagccatgtacttattaagcaactttgtaag 620
Query: 421 ttcttgaccaatcaaataaggtatgcttataaaatagttcaatttctattatacaattat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttcttgaccaatcaaataaggtatgcttataaaatagttcaatttctattatacaattat 680
Query: 481 tcaaaactgtcaaaataaggcagtcatctatcaccctttagcccattttgtacaacactt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tcaaaactgtcaaaataaggcagtcatctatcaccctttagcccattttgtacaacactt 740
Query: 541 gagccagtagtcactcaaaggaaactcaagtagaaaatccacaacaatgcgagtcaaaca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gagccagtagtcactcaaaggaaactcaagtagaaaatccacaacaatgcgagtcaaaca 800
Query: 601 catttactacaatggtaacatcccccaaagtggcaacattgcttcctgctg 651
||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 catttacaacaatggtaacatcccccaaagtggcaacattgcttcctgctg 851
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 651
Length of database: 1051
Length adjustment: 10
Effective length of query: 641
Effective length of database: 1041
Effective search space: 667281
Effective search space used: 667281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
