NAACTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCAGAGGATC
CGCGGAATTCTCAGCCCTTTCCAGACTGTATATACATACTCACATACATC
CCAGGGCTCATAGAATTGTAGAAGAGGAGGAAGAACTACAACAGTCAGAG
TGGTAGTTAACTACAATTAAACAGTGTTTGTAGACACAACAGGCAAGTTG
TTCATGTGAACTCAGCAAGTGTAACAGCATGCACAAGACCTAGTCAAGTT
CAAAGTCATAACAAAAAGACTAACATAAAGACAAGTTAGACATGAATACC
TACCTCTAGATAAGGAATATTGGCAATTGATAACTACCAGAAGAGGGAAA
GAGAAAGTCAGCTCTCTTTTAGGGTATGCCTCTAGTAGGTTGACTGCACC
CATGCTCTAATGGCCACACATCCAAGACTATATGGGCAGCACAAATTGAA
CATGATGTGCTTTAAAAAAATAAAAAATTAAAATACATCGTATGAGCCGG
GCGTGGTGGCGCACGCCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGC
GGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAAAGTAAGTTCCAGGACA
GCCAGGGCTATACAGAGAAACCCTGTCTCGAAAAACCAAAAAAAAAGAAA
AATATAGAAAAAGAAAAAAAAACCTCATATGAAATTCTTTACTGATAACA
ATAAGGGGGGAAAAAATCTGTTCTACAGTTTGCCCCTTAC

NAAGCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXCCACATAGGTTGTCCAGTCCC
AAATGGTCAACCCTGAACATGTGTACACATGAGCAAAGCTAGATGGATTT
CATAAGTTTTATATATATATATATATATATAAATATATATGTATGTATAC
ACACACACACACACACAGGTGTGTATACACATATATGTACATGATGTATA
TTTTTCAAAGGTATAAATTACAAAAAAGCAAATCTGACTTTAAGAAATGT
GTCTGAGGATATGTTTGGCAGTTTTGACAGATGGTCTGAGTAAATCTCAT
GGCCAAGGCAATACTTGTTTCCACCAAGTTATAGGCTAGAAAAATACCTC
AGCAGTTATGAGCTCTGGCTGATCTTCCAGAGGACCCAGATTCAATTTCC
AGCACCCACATGGCACCTCACAACCATATATTTATTACTCTAGTTCCAGG
GAAGCCAATGCCTTTTTGTGGCCTCTACAGACATCAGACATACACATGAT
GCACATACACACAGGCCATACACCATAAGGTATAAAACAAAACAAAACAA
TCAAGCCCCCCAACAACAAAAGAACAAAAGGAAAATATGTGGATGAGAAA
ATGCTAAAGAGACTGACTGGTATATTTGGAATGGAACCCCTAAGCTCAGG
GAAAATCACAGAAGAGTGTGTGATCAGGCTGTAAGAGC

Query= MSMg01no485_o02.g1 MSMg01no485_o02.g1 CHROMAT_FILE:
MSMg01no485_o02.g1 PHD_FILE: MSMg01no485_o02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:08:00 2005
         (656 letters)



>mm_chr1_95946367_95947423
          Length = 1057

 Score = 1139 bits (589), Expect = 0.0
 Identities = 646/675 (95%), Gaps = 19/675 (2%)
 Strand = Plus / Plus

                                                                       
Query: 1   ccacataggttgtccagtcccaaatggtcaaccctgaacatgtgtacacatgagcaaagc 60
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 183 ccacataggttgtccagtcccaaacggtcaaccctgaacatgtgtacacatgagcaaagc 242

                                                                       
Query: 61  tagatggatttcataagttttatatatatatatatatatata-a---atatatatgtatg 116
           |||||||||||||||||||||||||||||||||||||||||| |   |||||||| ||| 
Sbjct: 243 tagatggatttcataagttttatatatatatatatatatatatatatatatatatatata 302

                                                                       
Query: 117 tatacacacacacacacacaca--------------ggtgtgtatacacatatatgtaca 162
           ||||||||||||||||||||||              ||||||||||||||||||||||||
Sbjct: 303 tatacacacacacacacacacacacacacacacacaggtgtgtatacacatatatgtaca 362

                                                                       
Query: 163 tgatgtatatttttcaaaggtataaattacaaaaaagcaaatctgactttaagaaatgtg 222
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 tgatatatatttttcaaaggtataaattacaaaaaagcaaatctgactttaagaaatgtg 422

                                                                       
Query: 223 tctgaggatatgtttggcagttttgacagatggtctgagtaaatctcatggccaaggcaa 282
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 tctgaggatatgtttggcagttttgacagatggtctgagtaaatctcatggccaaggcaa 482

                                                                       
Query: 283 tacttgtttccaccaagttataggctagaaaaatacctcagcagttatgagctctggctg 342
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 tacttgtttccaccaagttataggctagaaaaatacctcagcagttatgagctctggctg 542

                                                                       
Query: 343 atcttccagaggacccagattcaatttccagcacccacatggcacctcacaaccatatat 402
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 543 atcttccagaggacccagattcaatttccagcacccacacggcacctcacaaccatatat 602

                                                                       
Query: 403 ttattactctagttccagggaagccaatgcctttttgtggcctctacagacatcagacat 462
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| 
Sbjct: 603 ttattactctagttccagggaagccaatgcttttttgtggcctctacagacatcagacac 662

                                                                       
Query: 463 acacatgatgcacatacacacaggccatacaccataaggtataaaacaaaacaaaacaat 522
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 663 acacatgatgcacatacacacaggccatacaccataaggtacaaaacaaaacaaaacaat 722

                                                                       
Query: 523 caagccccccaacaacaaaagaacaaaaggaaaatatgtggatgagaaaatgctaaagag 582
           |||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct: 723 caagccccccaacaacaaaagaacaaaaggaaaaaatgtgaatgagaaaatgctaaagag 782

                                                                       
Query: 583 actgactggtatatttggaatggaacccctaagctcagggaaaa-tcacagaagagtgtg 641
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 783 actgactggtatatttggaatggaacccctaagctcagggaaaaatcacagaagagtgtg 842

                          
Query: 642 tgatcaggctgtaag 656
           |||||||||||||||
Sbjct: 843 tgatcaggctgtaag 857


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 68
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 656
Length of database: 1057
Length adjustment: 10
Effective length of query: 646
Effective length of database: 1047
Effective search space:   676362
Effective search space used:   676362
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)