TCCCCCCACTGTGGTGCTATTGACTNCTATTCCTTAGATCGGTGAAGGCG
GGAGTTTCCACCAGAGAGAGGTCACAGGTCATTACCACTCTATCCAAGGT
CGGTCTTGACCTCAAGAAAATATCCAACGCGCTCATATAGGGCTTTTTTG
CTACACTCACCCGCTCTTTGTGGACTCTACCGTTGCCGGCCACCGCTCTT
AGTACTCTTAGCGGATTTAATATAGGTGAAACTGCTAAGTCCATCGCGTG
ACCACTACATACTAGCATCTTTAGCGACGAAAACCACCACTGCTTTGTCA
GGGAGGCCTACTGCCAAGAATCGTACGCTCGTTAAAGGATGCGTCTAATT
GGCTTCAGCACCTTCCCTTTGCTCCTAATACTCGCACACCTACCTATTCC
TTAGTTGCTATTATATTGTTTCGAAGAGGCGGTGTGGCCCCCCATGGAAC
TGGCTGTGCACGTATTCCTTGCATGCTTTCTTGCTAGCAATATTTCTCCG
CGTACACACCTTCCTTTTGTAATTATCGGGCACTGTTTGTCGCCGCGAAT
TTTATACAGATTTTTTCATCACCCCCTATTCTGGATTGTGACAATGCACA
CCGTAACCCCTACTCGTGGGTTCCACCACAATTTTTGTTTAACACTGAGG
CGGATTGTTTTGTATAGTCATTATACCTGCACCTCCTAATACAGGTTTTG
TGCCTCCACCACGCCGCACCGGCCTTCTTAGGAACCGCCGTTGGAGGTTT
GGAATTTCCTCCTTCAACTCTTATATTCCCCCCCCCCGTTATAGACATCT
ACCTCTTCACCCTTCTTATTAAATTATTTCCACCTTCCTGTCCCTTGATC
TAGG

NCCGATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXCACTTCTGAGGTAGTGGGCTGGAATT
TCCCTCCTCAGCCCATGATTTTATGAGGAATGTATGTAGGTAACTGTTAT
CAGGTTGTTAAGCAGTTTGATGAGGTGCTAAGTAGCCCTTTAATTGTTTT
ATTTACAACATACAGTTCACTAACATCTCATTGGGGAATTCTCTGCTTAG
TTGATTAATATAAGGCTAGTTTAGTGAAGTACAACTTGGCAAAGCCGGAA
GCTAAAAAAAATAGCCTTTTATATTTTAGCAGTCTTAAAGCCGTTTGATA
ATTTATTCAGTCGAGGTTAAAAAAAAATATTGGTGCTAACCAAAACATTT
AACAAATAATAGGGGAAATCAAGTTGGGGAAAAAATAACTAAATTGAAAT
CTACTACTCTGGCGTGCTTTGGGTTCCTTTTCATTTATTAGGATTAGGTG
GTTAGAATTGCTTTTAGAAATCAAATCTTCCCCTTATCTCTCCTCTGTGG
TTCTGGATCTGCACAGGTGAATCCCATACTGTTAGCCTGCTCTAGAAGGC
TGTCTTACCATTTGGATGGCGATGTGACAAACCAACCATCAAATATCACC
AAGCAGCAGAGAAAGGAGAGAGCCCCAGGAGCCACCGCAGAGGACCATAT
TGCCCACCAGTTAGGAGTAAGATGAGAGCCAAGCGACCCAGCAGCTCAAT
CGAGGN

Query= MSMg01no489_i15.g1 MSMg01no489_i15.g1 CHROMAT_FILE:
MSMg01no489_i15.g1 PHD_FILE: MSMg01no489_i15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:12:48 2005
         (675 letters)



>mm_chr1_62671303_62672377
          Length = 1075

 Score = 1183 bits (612), Expect = 0.0
 Identities = 660/676 (97%), Gaps = 2/676 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   cacttctgaggtagtgggctggaatttccctcctcagcccatgattttatgaggaatgta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 875 cacttctgaggtagtgggctggaatttccctcctcagcccatgattttatgaggagtgta 816

                                                                       
Query: 61  tgtaggtaactgttatcaggttgttaagcagtttgatgaggtgctaagtagccctttaat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 815 tgtaggtaactgttatcaggttgttaagcagtttgatgaggtgctaagtagccctttaat 756

                                                                       
Query: 121 tgttttatttacaacatacagttcactaacatctcattggggaattctctgcttagttga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 755 tgttttatttacaacatacagttcactaacatctcattggggaattctctgcttagttga 696

                                                                       
Query: 181 ttaatataaggctagtttagtgaagtacaacttggcaaagccggaagctaaaaaaaatag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 ttaatataaggctagtttagtgaagtacaacttggcaaagccggaagctaaaaaaaatag 636

                                                                       
Query: 241 ccttttatattttagcagtcttaaagccgtttgataatttattcagtcgaggttaaaaaa 300
           ||  | | |||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 635 ccactcaaattttagcagtcttaaagccgtttgataatttattcagtcgaggtt-aaaaa 577

                                                                       
Query: 301 aaatattggtgctaaccaaaacatttaacaaataataggggaaatcaagttgggg-aaaa 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 576 aaatattggtgctaaccaaaacatttaacaaataataggggaaatcaagttggggaaaaa 517

                                                                       
Query: 360 aataactaaattgaaatctactactctggcgtgctttgggttccttttcatttattagga 419
           |||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct: 516 aataactaaattgaaatctactactctggcgtgcttcgggttccttttcacttattagga 457

                                                                       
Query: 420 ttaggtggttagaattgcttttagaaatcaaatcttccccttatctctcctctgtggttc 479
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 ttaggtggttagaagtgcttttagaaatcaaatcttccccttatctctcctctgtggttc 397

                                                                       
Query: 480 tggatctgcacaggtgaatcccatactgttagcctgctctagaaggctgtcttaccattt 539
           ||||||||||||||||||||||||||||||||||||||||| |||||| | |||||||||
Sbjct: 396 tggatctgcacaggtgaatcccatactgttagcctgctctaaaaggctattttaccattt 337

                                                                       
Query: 540 ggatggcgatgtgacaaaccaaccatcaaatatcaccaagcagcagagaaaggagagagc 599
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 ggatggcgatgtgacaaaccaaccatcaaatatcaccaagcagcagagaaaggagagagc 277

                                                                       
Query: 600 cccaggagccaccgcagaggaccatattgcccaccagttaggagtaagatgagagccaag 659
           ||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 276 cccaggagccaccacagaggaccatattgcccaccagtcaggagtaagatgagagccaag 217

                           
Query: 660 cgacccagcagctcaa 675
           || |||||||||||||
Sbjct: 216 cggcccagcagctcaa 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 675
Length of database: 1075
Length adjustment: 10
Effective length of query: 665
Effective length of database: 1065
Effective search space:   708225
Effective search space used:   708225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)