NTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXATTCAAAAATAATCGGC
GGAATCTCTCCATTCCTAAAAAAGACTTAGGACAGCCTTTGAAACATCTA
ACTGTATTACCTAGGCTAGCTAGGGCACAGCTGGCAAAAATAATTTGTTT
TCCAATTTCTCCCCAGCCTCCTGAGCTGTGCTTGGTATTTCCAATGCAGC
CTTAGCTAGTTAAAACTCTGTAACGATGACTTTTAACCTCTGAGTCGTGA
TCTCTTTGGAGGTCAGCCTTTCACAGGGGTCACATGAGACCATCAGAAGA
CACATATATTTACATTACGTTCTTAACAGTAGCAAAATTTGAGCTATGAA
ATAGCAACAAAAAGTAATTTTATAGTTTGGTGGTCACCACACATGAAGAA
CTGAGTTAAAGAGTTACAGCATTAGGAAGCTTGAGAACCACTGTTCTAGA
AGGAAAGATGACACTGGATAGTCTTTGGATATTACCTTAAGGGGTGAGAA
AAGAATTGTTTCCTATAGGTATTATATAGCACAAAAAGATAAAAATAAAT
ATAGATTTATTGGCACCATAAGGACTGTAAAATACTCACTGCTTACTTTA
CTCTTCTTGCTCAAATCGGAGTAAATAAAGTAAATCAGAGAATCATAGGA
GGACCTGGCATCATTTATTATATGGAGTTGATCCTTGCTTTTTACTCTTA
ACTAACAATAAGCTTGTAAGAGCATTACAGAATTATATGGATTTT

NAACGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXCTCTCTAGGGGTAAGCGTCTGA
ATATCTGGCCCTGTTGTCAGCCCCTTGTCCTCTGCTTGCTGATTTGTGCC
ACATGAGCCAGGCTCCATTACATACTCCTGGTCCCATGACTGCAGCAAGG
CCTTCCCTGTCATGGTACATTGGAACGTCTGCATAGCCAGGAGCCAAAAT
AAACCCTTCTCCCTTTGAGTAGTTTCTGTCCGGTATATATATGGTCACAG
TAATGCAAAACTTAGCAACATATAACAGACCTTTGAGATCCAAGAAAGCA
ATATAAGGCAACCCCACCATTCACTACCTAAATCCAAGCTACCAAAAATA
AGAACTCAGAATACAGTGCAGGTAGCTAGGAGGATCAAGGGGGCAGGTTC
CTGTGTGGCAATGGCTCTCTGTGACTCTGTGGAACCAGATAGTGTTAGAA
GTCTGAAGCATGGCCCTCCGTGAAGGAGGAGCCCCCTCCTTCCCACTCAA
GAGCTTGGAGGGTTGAAACCTTCGCCAGACCAGCTACAAGGGAGGGTACT
ATGCTTCTCCTGCTTTTGCTTTGGGCCTGGCCTATGGCGTGGAGGGCGGG
GCAGCCGAGGATGAGCTGGCTGCTGCCTTCTGGCTCTGTGGGGCCTCTCA
AACCCCAGGGTTTGTTCAGGATGTTTTCTCTGACTCATGCGTGGTGATAA
CAN

Query= MSMg01no490_c13.b1 MSMg01no490_c13.b1 CHROMAT_FILE:
MSMg01no490_c13.b1 PHD_FILE: MSMg01no490_c13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:13:40 2005
         (421 letters)



>mm_chr1_82989639_82990459
          Length = 821

 Score =  814 bits (421), Expect = 0.0
 Identities = 421/421 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   aacagtagcaaaatttgagctatgaaatagcaacaaaaagtaattttatagtttggtggt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 aacagtagcaaaatttgagctatgaaatagcaacaaaaagtaattttatagtttggtggt 681

                                                                       
Query: 61  caccacacatgaagaactgagttaaagagttacagcattaggaagcttgagaaccactgt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 caccacacatgaagaactgagttaaagagttacagcattaggaagcttgagaaccactgt 621

                                                                       
Query: 121 tctagaaggaaagatgacactggatagtctttggatattaccttaaggggtgagaaaaga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tctagaaggaaagatgacactggatagtctttggatattaccttaaggggtgagaaaaga 561

                                                                       
Query: 181 attgtttcctataggtattatatagcacaaaaagataaaaataaatatagatttattggc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 attgtttcctataggtattatatagcacaaaaagataaaaataaatatagatttattggc 501

                                                                       
Query: 241 accataaggactgtaaaatactcactgcttactttactcttcttgctcaaatcggagtaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 accataaggactgtaaaatactcactgcttactttactcttcttgctcaaatcggagtaa 441

                                                                       
Query: 301 ataaagtaaatcagagaatcataggaggacctggcatcatttattatatggagttgatcc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ataaagtaaatcagagaatcataggaggacctggcatcatttattatatggagttgatcc 381

                                                                       
Query: 361 ttgctttttactcttaactaacaataagcttgtaagagcattacagaattatatggattt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ttgctttttactcttaactaacaataagcttgtaagagcattacagaattatatggattt 321

            
Query: 421 t 421
           |
Sbjct: 320 t 320


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 421
Length of database: 821
Length adjustment: 9
Effective length of query: 412
Effective length of database: 812
Effective search space:   334544
Effective search space used:   334544
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no490_c13.g1 MSMg01no490_c13.g1 CHROMAT_FILE:
MSMg01no490_c13.g1 PHD_FILE: MSMg01no490_c13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:13:40 2005
         (576 letters)



>mm_chr1_82830531_82831506
          Length = 976

 Score = 1029 bits (532), Expect = 0.0
 Identities = 565/576 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctctctaggggtaagcgtctgaatatctggccctgttgtcagccccttgtcctctgcttg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 201 ctctctaggggtaagcgtctgaatatctggccctgttgtcagccccttgtcctctgctta 260

                                                                       
Query: 61  ctgatttgtgccacatgagccaggctccattacatactcctggtcccatgactgcagcaa 120
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 261 ctgatttgtgccacatgagccaggctccattacatactcctggtcccatgaccgcagcaa 320

                                                                       
Query: 121 ggccttccctgtcatggtacattggaacgtctgcatagccaggagccaaaataaaccctt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggccttccctgtcatggtacattggaacgtctgcatagccaggagccaaaataaaccctt 380

                                                                       
Query: 181 ctccctttgagtagtttctgtccggtatatatatggtcacagtaatgcaaaacttagcaa 240
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctccctttgagtagtttctgtccagtatatatatggtcacagtaatgcaaaacttagcaa 440

                                                                       
Query: 241 catataacagacctttgagatccaagaaagcaatataaggcaaccccaccattcactacc 300
           |||| |||||||||||||||||||||||||||| |||| |||||||||||||||||| ||
Sbjct: 441 cataaaacagacctttgagatccaagaaagcaacataaagcaaccccaccattcacttcc 500

                                                                       
Query: 301 taaatccaagctaccaaaaataagaactcagaatacagtgcaggtagctaggaggatcaa 360
           |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||
Sbjct: 501 taaatccaagctaccaaaaataagaactcagaatacagtgcaggtagcaaggaggaccaa 560

                                                                       
Query: 361 gggggcaggttcctgtgtggcaatggctctctgtgactctgtggaaccagatagtgttag 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 561 gggggcaggttcctgtgtggcaatggctctctgtgactctgtggaaccagacagtgttag 620

                                                                       
Query: 421 aagtctgaagcatggccctccgtgaaggaggagccccctccttcccactcaagagcttgg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aagtctgaagcatggccctccgtgaaggaggagccccctccttcccactcaagagcttgg 680

                                                                       
Query: 481 agggttgaaaccttcgccagaccagctacaagggagggtactatgcttctcctgcttttg 540
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 agggttgaaacctccgccagaccagctacaagggagggtactatgcttctcctgcttttg 740

                                               
Query: 541 ctttgggcctggcctatggcgtggagggcggggcag 576
           ||||||||||||||||||||||||||||||||||||
Sbjct: 741 ctttgggcctggcctatggcgtggagggcggggcag 776


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 576
Length of database: 976
Length adjustment: 10
Effective length of query: 566
Effective length of database: 966
Effective search space:   546756
Effective search space used:   546756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)