NNNTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCACAACTTAACACTCTTGAATGACTGAGAAGCATGTAAATAA
TATTCAAAGTCCTTAGTCATCAAAGAAATGCAAATCAGAACAACTCTGGG
TTTCCACCTCATATCAATCAGAATGGCTAAGATCAAAAACTCAAGTGAAA
ACACATGCTGGCTGGTGAGGATGTGGAGAAAAATAATGTCACCTCCATTG
AGTCCTGAGAGTATCTCACTACCTCCATTGCTGGTGGGCTTGCAAACATG
TACAAGCACTCTAGAAATCAATCTGGCAGTTCCTCAGAAAATTGGAAATA
GTTCTACCTGAAAACCCACCTATACCACTCTTGGGCATATACTCAAAAGA
TGGCCTGCCATACCAAATGGACATATACTCCAACATGTTCATAGCAGACT
TAATTTGTAATAACTAGAAGCTGTAAACAGCCCAGATGTCCCTCAACCTA
AGAATGGATATAGAATATGTGGTTCACTTACACAATGTAATAGTATTAAG
TATTAAAAATGAGAATATCATGAGTTTTGCAGACAAATGAATGGAACTAG
AAAATATTATCCTTAGTGAGGTAACTCAGACCCAAAAGGACATGCATGGT
ATGTACTCACTGATAAGAATACCTAGGATACAATCTACAGACCATAAGAA
ATATAGCACACAGAAATGCCAAGTGAGGAGGCTTTACTTCCACTTGGAAG
GGGGA

CATTGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTTTGTTCAGAAAATTAACAAAGAAC
TGAGAAACAAAGTCACCTGGGACTGTAGTGTGCTTATGTTAGAGTAGTCC
AGTGAAGTGCCAAGGAATTACTCTAATGTATTATTAACAGAAAAAATAAG
TATGGATAAAATATATTAAAGTAAAGAATTTCAGGGAAGAATACTGAACA
GCTTTGAACATATAACTCCCAACATAACATAATGCAAACAAAACCAAGAA
GAGCAAAGTGCACTGAGACTCCCTTTCTTCCTAAGCTGCACAGACACCTT
TCACTCTTCCATGTTTTAAAACAAGCACAAGCCACATTTGTTCTCATGTT
ATATAAGAAAGGTTTTCTTGGGAACAACTAGCACTTTGATGTTACACCTA
GAACTTTCTATGAGGTCTGTGGTTTTGTTTTTTGTAGTGGGTATGGTGGA
ATATTATTTGTTGCTGAAGCCTAAAAGCACCAGGTCAAGCTCAGCCATAG
CAAGAAACCTGTTATGGATTTCTTGGTGAGGAGTAATCCTTTGAAACTGA
AATCTAGACCATTAAACACATAGATATAAACACAAATGGAATCATGAGCT
CATAGTGATGCTTCTTATCAAACCCAACATCATATACTTTCCCAGTTTTT
CCCCATTCCCCATCTTCTATAGTGAGAGCATTTATATCAATGGTAGGAAT
ATGTTAACCAATAATACTGTTCTTTG

Query= MSMg01no490_c20.g1 MSMg01no490_c20.g1 CHROMAT_FILE:
MSMg01no490_c20.g1 PHD_FILE: MSMg01no490_c20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:13:41 2005
         (696 letters)



>mm_chr1_7422015_7423109
          Length = 1095

 Score = 1214 bits (628), Expect = 0.0
 Identities = 679/696 (97%), Gaps = 1/696 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tttgttcagaaaattaacaaagaactgagaaacaaagtcacctgggactgtagtgtgctt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttgttcagaaaattaacaaagaactgagaaacaaagtcacctgggactgtagtgtgctt 260

                                                                       
Query: 61  atgttagagtagtccagtgaagtgccaaggaattactctaatgtattattaacagaaaaa 120
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 261 atgttagagtagtccagtgaagtgccaatgaattactctaatgtattattaacagaaaaa 320

                                                                       
Query: 121 ataagtatggataaaatatattaaagtaaagaatttcagggaagaatactgaacagcttt 180
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 321 ataagtatggataaaatatattaaagtaaagaatttcaaggaagaatactgaacagcttt 380

                                                                       
Query: 181 gaacatataactcccaacataacataatgcaaacaaaaccaagaagagcaaagtgcactg 240
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaacacataactcccaacataacataatgcaaacaaaaccaagaagagcaaagtgcactg 440

                                                                       
Query: 241 agactccctttcttcctaagctgcacagacacctttcactcttccatgttttaaaacaag 300
            | ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gggctccctttcttcctaagatgcacagacacctttcactcttccatgttttaaaacaag 500

                                                                       
Query: 301 cacaagccacatttgttctcatgttatataagaaaggttttcttgggaacaactagcact 360
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 501 cacaagccacatttgttctcatgttatacaagaaaggttttcttgggaacaactagcact 560

                                                                       
Query: 361 ttgatgttacacctagaactttctatgaggtctgtggttttgttttttgtagtgggtatg 420
           |||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 561 ttgatgctacacctagaactttctatgaggtctatggttttgttttttgtagtgggtatg 620

                                                                       
Query: 421 gtggaatattatttgttgctgaagcctaaaagcaccaggtcaagctcagccatagcaaga 480
            |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 -tggaatattaattgttgctgaagcctaaaagcaccaggtcaagctcagccatagcaaga 679

                                                                       
Query: 481 aacctgttatggatttcttggtgaggagtaatcctttgaaactgaaatctagaccattaa 540
           |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 680 aacctgttatagatttcttggtgaggagtaatactttgaaactgaaatctagaccattaa 739

                                                                       
Query: 541 acacatagatataaacacaaatggaatcatgagctcatagtgatgcttcttatcaaaccc 600
           ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 740 acacatagatataaacacaaatgcaatcatgagctcatactgatgcttcttatcaaaccc 799

                                                                       
Query: 601 aacatcatatactttcccagtttttccccattccccatcttctatagtgagagcatttat 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 800 aacatcatatactttcccagtttttccccattccccatcttctatagtgagagcattcat 859

                                               
Query: 661 atcaatggtaggaatatgttaaccaataatactgtt 696
           ||||| ||||||||||||||||||||||||||||||
Sbjct: 860 atcaacggtaggaatatgttaaccaataatactgtt 895


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 696
Length of database: 1095
Length adjustment: 10
Effective length of query: 686
Effective length of database: 1085
Effective search space:   744310
Effective search space used:   744310
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)