Query= MSMg01no490_g20.b1 MSMg01no490_g20.b1 CHROMAT_FILE:
MSMg01no490_g20.b1 PHD_FILE: MSMg01no490_g20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:14:01 2005
(610 letters)
>mm_chr1_106537252_106538262
Length = 1011
Score = 1048 bits (542), Expect = 0.0
Identities = 590/608 (97%), Gaps = 6/608 (0%)
Strand = Plus / Plus
Query: 5 gaattcattctttaccttttt-tttatagtccaactactctagtcaatcatttttccttc 63
|||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||
Sbjct: 205 gaattcattctttagttttttctttatagtctaactactctagtcaatcatttttccttc 264
Query: 64 tgaaaaatgggacaaaatgatggttgaaagatgtctgtgatggatcagaaaagagcaggt 123
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgaaaaatgggacaaaatcatggttgaaagatgtctgtgatggatcagaaaagagcaggt 324
Query: 124 tctattcctatttaagatcatattcacaaacctggaaaaggcttttcaatgcataattgt 183
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 325 tctattcctatttaagatcatattcacaaacctgcaaaaggcttttcaatgcataattgt 384
Query: 184 attaaaggaaaatattttaagaatgcagagataaatattatttataagtaaagattgtac 243
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 attagaggaaaatattttaagaatgcagagataaatattatttataagtaaagattgtac 444
Query: 244 agtttagcagatattttaatatatatatatagtttaggacatgttatatataatattcaa 303
|||| |||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 445 agttaagcagatattttaatatatata----gtttaggacatgttatatataatattcaa 500
Query: 304 gaacatattatatacttaatacataatgatagctatttagttactcataatatagtcata 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gaacatattatatacttaatacataatgatagctatttagttactcataatatagtcata 560
Query: 364 ccctacataccctacatgtagctatattttcctggacacttttaacacaaacaccctgat 423
||||||||||||||| |||||||||||||||||| |||||||||||||||||||||| ||
Sbjct: 561 ccctacataccctacgtgtagctatattttcctgtacacttttaacacaaacaccctaat 620
Query: 424 tatgagatcccacaaagagcataccaaagttttttgagattagtatttcatgcgatttac 483
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 621 tatgagatcccacaaagagcatagcaaagttttttgagattagtatttcatgcgatttac 680
Query: 484 tctttaacacaaataacctgctcttcctttgcagtcttcttggtcttgccatggagggac 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tctttaacacaaataacctgctcttcctttgcagtcttcttggtcttgccatggagggac 740
Query: 544 tcctgctttcataactctgcttactcatggttacaaaacaatttctccccctctagacac 603
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 741 tcctgctttcataactctgcttactcatggttacaaaacattttctccccctctagacac 800
Query: 604 tg-aaaaa 610
|| |||||
Sbjct: 801 tgtaaaaa 808
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 610
Length of database: 1011
Length adjustment: 10
Effective length of query: 600
Effective length of database: 1001
Effective search space: 600600
Effective search space used: 600600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no490_g20.g1 MSMg01no490_g20.g1 CHROMAT_FILE:
MSMg01no490_g20.g1 PHD_FILE: MSMg01no490_g20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:14:01 2005
(635 letters)
>mm_chr1_106670180_106671214
Length = 1035
Score = 712 bits (368), Expect = 0.0
Identities = 371/372 (99%)
Strand = Plus / Minus
Query: 264 attactcaactatatatgcatggacctgaagcacattcagcagagtaaatacactatgca 323
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1035 attactcaactatatatgcatggacctgaagcacattcagcagagtaaatacactatgca 976
Query: 324 gagaaagaataatattgcatgacttcacttatatgattgtaaaaatgggcaaggagagag 383
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 975 gagaaagaataatattgcatgacttcacttatatgattgtaaaaatgggcaaggagagag 916
Query: 384 atgtagaaagaaaaagaaaagcaccattcactagggtcaaggctgggggtggtgttgaga 443
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 915 atgtagaaagaaaaagaaaagcaccattcaccagggtcaaggctgggggtggtgttgaga 856
Query: 444 tgtagagcaaaggatagaaatgtggaagcgaaacaagttcaacgctggggacagtagttg 503
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 855 tgtagagcaaaggatagaaatgtggaagcgaaacaagttcaacgctggggacagtagttg 796
Query: 504 agagcatcacagtgtagcacgcttttgcccaaatgagtggatggtggctgttctttcata 563
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 795 agagcatcacagtgtagcacgcttttgcccaaatgagtggatggtggctgttctttcata 736
Query: 564 ggaagatgggcaactgtgtgagatggtggggatgctcagtctgtttgactaaagtaagga 623
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 ggaagatgggcaactgtgtgagatggtggggatgctcagtctgtttgactaaagtaagga 676
Query: 624 tgttacttttca 635
||||||||||||
Sbjct: 675 tgttacttttca 664
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 635
Length of database: 1035
Length adjustment: 10
Effective length of query: 625
Effective length of database: 1025
Effective search space: 640625
Effective search space used: 640625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
