Query= MSMg01no491_o22.b1 MSMg01no491_o22.b1 CHROMAT_FILE:
MSMg01no491_o22.b1 PHD_FILE: MSMg01no491_o22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:16:00 2005
(435 letters)
>mm_chr1_166619670_166620503
Length = 834
Score = 791 bits (409), Expect = 0.0
Identities = 428/437 (97%), Gaps = 7/437 (1%)
Strand = Plus / Plus
Query: 4 ggaattccatagagaatagcttttccttcttttatctattcttacttcagctgggctgtg 63
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccatagagaa-agcttttccttcttttatctattcttacttcagctgggctgtg 262
Query: 64 tttttccccaggtccatggtttctgcaactgagctctgtccaattttatgatgaggtttg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 tttttccccaggtccatggtttctgcaactgagctctgtccaattttatgatgaggtttg 322
Query: 124 gtgtcaatggcttttagttaacaagagtaagagataacatgggagaaaggcaagtcatag 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 gtgtcaatggcttttagttaacaagagtaagagataacatgggagaaaggcaagtcatag 382
Query: 184 atagtttcctctcttattcttgagttctagagattcactttgttctcagtaatggctaac 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 atagtttcctctcttattcttgagttctagagattcactttgttctcagtaatggctaac 442
Query: 244 aagtcctcagggattttggccccatgtgcactaggaatggagtaatctatagagaacact 303
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 443 aagtcctcagggattttggccccatgtgcactaggaatggaataatctatagagaacact 502
Query: 304 cacgtaagaccaatgacacccctctttggctaaaaggaagtggtatttcccacagccaaa 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 cacgtaagaccaatgacacccctctttggctaaaaggaagtggtatttcccacagccaaa 562
Query: 364 gtagaaagtacaagcaaagagaaggatcaagagttcttctgggatggggagaggggagag 423
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
Sbjct: 563 gtagaaagtacaagcaaagagaaggatcaagagttcttctgggatggggagaggagag-g 621
Query: 424 a-----tgttgggtgga 435
| |||||||||||
Sbjct: 622 agcctttgttgggtgga 638
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 435
Length of database: 834
Length adjustment: 9
Effective length of query: 426
Effective length of database: 825
Effective search space: 351450
Effective search space used: 351450
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no491_o22.g1 MSMg01no491_o22.g1 CHROMAT_FILE:
MSMg01no491_o22.g1 PHD_FILE: MSMg01no491_o22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:16:00 2005
(583 letters)
>mm_chr1_166739763_166740744
Length = 982
Score = 1073 bits (555), Expect = 0.0
Identities = 573/579 (98%), Gaps = 1/579 (0%)
Strand = Plus / Minus
Query: 1 tcttcctattaatgaaccacttatgactgggactatggtacagccctagaaagaacactt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 933 tcttcctattaatgaaccacttatgactgggactatggtacagccctagaaagaacactt 874
Query: 61 gcctagaatgacggattcctggtaacgcaagaaaacaagaaacttcagcctagtctgtct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 873 gcctagaatgacggattcctggtaacgcaagaaaacaagaaacttcagcctagtctgtct 814
Query: 121 gtctgtctgtctgtctgtctgtctctctctctgtcatgcatatgggtgcacacacagtca 180
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||
Sbjct: 813 gtctgtctgtctgtctgtctgtctgtctctctgtcatgcatatgggtgcacacacagaca 754
Query: 181 tataagacccaaacactgtgctagacaatcattggttatgcaaagatcaatgagttttcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 753 tataagacccaaacactgtgctagacaatcattggttatgcaaagatcaatgagttttcc 694
Query: 241 tataccaggtattcaaagtctgggtagaaagaggtatccatacacagaatgtaatagcgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 693 tataccaggtattcaaagtctgggtagaaagaggtatccatacacagaatgtaatagtgt 634
Query: 301 gttgttctcatccttacagactgcaaactgcagttttcatcagacttttttttatggaaa 360
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 633 gttgttctcatccttacagactgcaaactgcagttttcatcagac-tttttttatggaaa 575
Query: 361 cacagtaaataaaccttgccatcatttccaatgatgcattgaggttttcagagaagtaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 cacagtaaataaaccttgccatcatttccaatgatgcattgaggttttcagagaagtaaa 515
Query: 421 ggtgcctttccagggacgttatagaggggacaacgaggaaagaggtcacagtaaaaaatg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 ggtgcctttccagggacgttatagaggggacaacgaggaaagaggtcacagtaaaaaatg 455
Query: 481 gcacggagcctgagattcaggatgcccttgcctgtaccagcattccttgggcccagcata 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 454 gcacggagcctgagattcaggatgcccttgcctgtaccagcattccttgggcccaacata 395
Query: 541 gcatgcagatctttggtttttgattctggatctgcttgg 579
||||||||||||||||| |||||||||||||||||||||
Sbjct: 394 gcatgcagatctttggtctttgattctggatctgcttgg 356
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 583
Length of database: 982
Length adjustment: 10
Effective length of query: 573
Effective length of database: 972
Effective search space: 556956
Effective search space used: 556956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
