XXXXXXXXXXXXXXXXXXXXXXXTTTCGAGGATCCGCGGAATTCTCAACT
GAGGTCTACCGAATAGCTGAGAAAAAAAAAACTAAAAATGTTCAACACCC
TTAATCATCAGGAAAATGCAAATCAAAACATCCCTGAGATTCTACCTCAC
ACCAGTCAGAATGGCTAAGACCAGAAACTCAGGTGACAGCAGATGGAGAA
AGAGGAACACGTCTGCATTGCTGATGGGATTGCAAGAGTGTACAACCACA
CTTAAAATCAGTCTGGTGGTGACTCAGAAAATTGGACATAGTACTACTGG
ACGATCCAGCAATACCATCTCCTGGGCATATACCCAGAAGGTGTTTCAAC
TTGTAATAAGGGCACATGCTCCACTATGTTTAAGCAGCCTTATTTATAAT
AGCCAGAAGCTAGAAAATACCCATATGTCCCTCAACAGAGGAATGGATAC
AGAAAATGTGGTACATTTATAAAATGGAGTACCACTCAACTATTAAAAAC
AATGAATTTATGAAATTCTTAGCCAAATAGATAGATCTGGAGGATATCAT
CCTGTGTGAGTTAACCCAATAACAAAAGAACACACATGATATGCACTCCC
TGACAAGTGGATATTAGCTCAGAAATTTGGAATACCCAAGATATAATTTG
CCAAACTCATGAAACTCAAGAAGATAGAATACCAAAGTTTTGATAATCCT
TTCCTTGTTAGAAGGGGGAACAAAATACCCATGGATGGAGTTA

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXACTACAAAGGTCCCTGGCAGACATGAAGCATGAAATAGA
GGCAAATTAGGGAACTCCAGTTATATTGAAAGAGCCTATTTCTTCACCAT
CAAATAAGGTAGTGAGTAATTGAGGAAAACACTAGAAATTGACTTCTGGC
TTCTACTTAAACATATCATGAAGATCATTCTAGTATTCTCTGTGTCATCT
TTTTAATACCATCCCATGTTCATTCTCTTATCTTCAGATGCTCACTAGCA
TTGAATATCTCTGAGTAGAACTCAGCATTTTTTTTCATTTTACACTTATG
ATTTTTATATAAAACCTTTATCTACTCTGATTCCCCCCACCCCTAGGTGA
AAAACACTTGGATAAAATACAGTCTACATTTTCAAAATATGAAAATAAGA
ATCAGTAAAATTACACATTACAGCATTTTTAGTCAACCATGGCTCAAATT
TGTAACTCTGGGACCTTGTGATTTATGTCCCATACTAACACTGTAATTCT
CTTTCTTTGTTTCATAACACTTTAGAAGACACATGGTTAAAAAAAAAAAA
GCAATGCACTTCTCAGACCATGGCCCCAGTGGGTAAATGAGGTACCTCAA
TAATGATTTCTAAAGAATATATATTTTTATAGATAAAGGAATAAAAAGGC
AAGGAAACACTACACACTCCTGTTCTTGTGAAAGAATTTGGTGGGCCTC

Query= MSMg01no491_p06.g1 MSMg01no491_p06.g1 CHROMAT_FILE:
MSMg01no491_p06.g1 PHD_FILE: MSMg01no491_p06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:16:02 2005
         (573 letters)



>mm_chr1_103801202_103802175
          Length = 974

 Score = 1098 bits (568), Expect = 0.0
 Identities = 571/572 (99%), Gaps = 1/572 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   actacaaaggtccctggcagacatgaagcatgaaatagaggcaaattagggaactccagt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772 actacaaaggtccctggcagacatgaagcatgaaatagaggcaaattagggaactccagt 713

                                                                       
Query: 61  tatattgaaagagcctatttcttcaccatcaaataaggtagtgagtaattgaggaaaaca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 tatattgaaagagcctatttcttcaccatcaaataaggtagtgagtaattgaggaaaaca 653

                                                                       
Query: 121 ctagaaattgacttctggcttctacttaaacatatcatgaagatcattctagtattctct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 ctagaaattgacttctggcttctacttaaacatatcatgaagatcattctagtattctct 593

                                                                       
Query: 181 gtgtcatctttttaataccatcccatgttcattctcttatcttcagatgctcactagcat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 gtgtcatctttttaataccatcccatgttcattctcttatcttcagatgctcactagcat 533

                                                                       
Query: 241 tgaatatctctgagtagaactcagcattttttttcattttacacttatgatttttatata 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 tgaatatctctgagtagaactcagcattttttttcattttacacttatgatttttatata 473

                                                                       
Query: 301 aaacctttatctactctgattccccccacccctaggtgaaaaacacttggataaaataca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 aaacctttatctactctgattccccccacccctaggtgaaaaacacttggataaaataca 413

                                                                       
Query: 361 gtctacattttcaaaatatgaaaataagaatcagtaaaattacacattacagcattttta 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 gtctacattttcaaaatatgaaaataagaatcagtaaaattacacattacagcattttta 353

                                                                       
Query: 421 gtcaaccatggctcaaatttgtaactctgggaccttgtgatttatgtcccatactaacac 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 gtcaaccatggctcaaatttgtaactctgggaccttgtgatttatgtcccatactaacac 293

                                                                       
Query: 481 tgtaattctctttctttgtttcataacactttagaagacacatggtt-aaaaaaaaaaaa 539
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 292 tgtaattctctttctttgtttcataacactttagaagacacatggttaaaaaaaaaaaaa 233

                                           
Query: 540 gcaatgcacttctcagaccatggccccagtgg 571
           ||||||||||||||||||||||||||||||||
Sbjct: 232 gcaatgcacttctcagaccatggccccagtgg 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 573
Length of database: 974
Length adjustment: 10
Effective length of query: 563
Effective length of database: 964
Effective search space:   542732
Effective search space used:   542732
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)