ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCAGCTAGTTCACTCACAGGTCCCCAGTTGACAGCCAGCCACAGCTTGCC
AGCAAATGAAGAAGACAGTAATAAAATGGAGACACCAGTAGCCAACGCTG
TAACACCACAAACCCTAGAGGTTTTGAGTGGCAGGTATAGAGGTGAGCAA
GTGTGGGCTTCACAGTAAACCTGCCACCACGAAGTGGTAAAGTCCGTCTT
CAGGGGCTGTGGAAGACAGTTTTCACATTCATTTGTATGAGGACTGAAGG
TAAGAACTGGTTATGATAGCTGCTTAGTGGGGTTAAAGCAGTGAATTCTC
CACCATGCTTGTCACCTGTCCCTTTGCCCTGCTCACCTTTCTCCTTTCCT
ACACCAGGCTTCCTCCTTGCTGTCTGGCTAAGCTTGTACATTGCCCTGAC
CTAGATGCTATGCACTCGATTGCTGGGGCCTTTCCTCATTGCCTTGACAT
TTTAATGATGACTTTATATGGTTTTCGCTGTTACAAAGTGGAGTAAGCAA
GAACTGGGAATTCTCGTGTTCTCCGGGGAGACATTTGTGGCAAGCCTCCT
GTGAGGGGATAGATTGCCCACACTTCTTGCTGTTTCCTTGGCTCTCTTCA
TTCCTGCTTGTCTTTGGTCTTGTTTTGATATGGGGGGGGTGTCCTTTCTT
GGCAACTCTACCATT

ATGCAGTGCGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXTGTTCCCAGGNAATGCGTAGTTCTCTTCAGTTCTTTATTAGAGC
CGAAGACTTAAGTGCTTTCACCACCCGTGTTCCTTAATGAAGTGTGAGGT
CCACACTCATCTGTGGGCAGAAGGACGAAGAATTTATAATGGGGTCAGGG
GTTAGGTTGGGATAGTAAGATGGCAGTTGCATTTTCCCCTTTTTGACCGC
GATGTTCCAGCTTTGGCACGGTTTCCCTCCTGCTGAATGCGTCTTCCACC
CAGCTATATTTTTTTTGTTAGCCGCCCTTCCCGTCCTACTGTCCCTCTAT
CCGTGTTTTCGTATCCCCTTTCTACTTTCGCGTCCATTCTCTTCCTTTGT
CTTCCCTGTTCGGCATATTCCCCTCCTTCCTTGATACTCTATCTTTATCC
GCTTATCTTGATAGCTTCTCTTATGTCCTTTTTTACGCCCTCAGCTTTCT
CTTTCCCTCTCCTCGCTTCTTCTTATAGCTGCCCCTGTTTCCCCTTTTTC
CCTCCTGCTACCTTTACCCTTCTCCATTTCTCATGCCCTTCCCCTTCGTC
TTCCTTTCCCTTGTCCTCTCTATCTCCTCCCTCTTTTCCCCATACTTTAT
CCCCCTTCATGCTTTTTTGGGCTTATTCGCAATTTCTTCCTTCCCATTTA
TCCTTTTATCGCCCTCCCTATTTTCTCCCTTTTTCCGCCCCCTCTCCGGT
TTAATCTTCCTATTACTTTCTCCCCTCTCATTCCCCCAATTCGCCTTTAC
CCTATTTCATTTTCCT

Query= MSMg01no492_g16.b1 MSMg01no492_g16.b1 CHROMAT_FILE:
MSMg01no492_g16.b1 PHD_FILE: MSMg01no492_g16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:16:38 2005
         (535 letters)



>mm_chr1_55953668_55954602
          Length = 935

 Score =  973 bits (503), Expect = 0.0
 Identities = 527/535 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   gtccccagttgacagccagccacagcttgccagcaaatgaagaagacagtaataaaatgg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 gtccccagttgacagccagccacagcttgccagcaaatgaagaagacagtaataaaatgg 676

                                                                       
Query: 61  agacaccagtagccaacgctgtaacaccacaaaccctagaggttttgagtggcaggtata 120
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 agacatcagtagccaacgctgtaacaccacaaaccctagaggttttgagtggcaggtata 616

                                                                       
Query: 121 gaggtgagcaagtgtgggcttcacagtaaacctgccaccacgaagtggtaaagtccgtct 180
           ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||
Sbjct: 615 gaggtgagcaagtgtgggcttcacagtaaacttgcaaccacgaagtggtaaagtccgtct 556

                                                                       
Query: 181 tcaggggctgtggaagacagttttcacattcatttgtatgaggactgaaggtaagaactg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 tcaggggctgtggaagacagttttcacattcatttgtatgaggactgaaggtaagaactg 496

                                                                       
Query: 241 gttatgatagctgcttagtggggttaaagcagtgaattctccaccatgcttgtcacctgt 300
           |  | ||||||||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct: 495 gggaggatagctgcttagtggggttaaagcagtgaattctccaccacgtttgtcacctgt 436

                                                                       
Query: 301 ccctttgccctgctcacctttctcctttcctacaccaggcttcctccttgctgtctggct 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 ccctttgccctgctcacctttctcctttcctacaccaggcttcctccttgctgtctggct 376

                                                                       
Query: 361 aagcttgtacattgccctgacctagatgctatgcactcgattgctggggcctttcctcat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 aagcttgtacattgccctgacctagatgctatgcactcgattgctggggcctttcctcat 316

                                                                       
Query: 421 tgccttgacattttaatgatgactttatatggttttcgctgttacaaagtggagtaagca 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 tgccttgacattttaatgatgactttatatggttttcgctgttacaaagtggagtaagca 256

                                                                  
Query: 481 agaactgggaattctcgtgttctccggggagacatttgtggcaagcctcctgtga 535
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 agaactgggaattctcgtgttctccggggagacatttgtggcaagcctcctgtga 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 535
Length of database: 935
Length adjustment: 10
Effective length of query: 525
Effective length of database: 925
Effective search space:   485625
Effective search space used:   485625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)