Query= MSMg01no493_e15.b1 MSMg01no493_e15.b1 CHROMAT_FILE:
MSMg01no493_e15.b1 PHD_FILE: MSMg01no493_e15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:17:45 2005
(512 letters)
>mm_chr1_74058384_74059295
Length = 912
Score = 930 bits (481), Expect = 0.0
Identities = 502/509 (98%)
Strand = Plus / Minus
Query: 4 ggaattcttggttctgcctctgagcgggaggggccgctgcaacgacagcagtgaaaagca 63
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 ggaattcttgggactgcctctgagcgggaggggccgctgcaacgacagcagtgaaaagca 653
Query: 64 ctttatgcacttttggatgtggattcgggaaggagataggaggtcacaagatggatccga 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 ctttatgcacttttggatgtggattcgggaaggagataggaggtcacaagatggatccga 593
Query: 124 gtgaaagtgagctttccattcaccagcctgcaccagagctgtcctcccagcaccaacaac 183
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 592 gtgaaagtgagctttccattcaccagcctgcaccagagctgtccttatagcaccaacaac 533
Query: 184 cacacatatcaccacgacttgcacagcacttatggttctcaacaccttttccctggctga 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 cacacatatcaccacgacttgcacagcacttatggttctcaacaccttttccctggctga 473
Query: 244 gggcaggtgggcttgggacctacatgggcacctgagcagcctgtgttcatcctggagagg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 gggcaggtgggcttgggacctacatgggcacctgagcagcctgtgttcatcctggagagg 413
Query: 304 caggcggggccatttatagtggttagatcagggcacaggaaggctgactgcctttttttt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 caggcggggccatttatagtggttagatcagggcacaggaaggctgactgcctttttttt 353
Query: 364 cgcaggtacaagctggtagtagcccactagaggggcaccctggtctgtgtccttgggatt 423
|||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||
Sbjct: 352 cgcaggtacaagctggtagtggcccactagaggggcaccctggtctgtgtccttgagatt 293
Query: 424 acctgggaactcaatttgggcttctcatggtccctaaggtctctgctgtccagtgggctg 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 acctgggaactcaatttgggcttctcatggtccctaaggtctctgctgtccagtgggctg 233
Query: 484 gagtgctgagagaagatctatcgtctatt 512
|||||||||||||||||||||||||||||
Sbjct: 232 gagtgctgagagaagatctatcgtctatt 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 512
Length of database: 912
Length adjustment: 10
Effective length of query: 502
Effective length of database: 902
Effective search space: 452804
Effective search space used: 452804
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no493_e15.g1 MSMg01no493_e15.g1 CHROMAT_FILE:
MSMg01no493_e15.g1 PHD_FILE: MSMg01no493_e15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:17:45 2005
(640 letters)
>mm_chr1_73907146_73908190
Length = 1045
Score = 1172 bits (606), Expect = 0.0
Identities = 634/646 (98%), Gaps = 7/646 (1%)
Strand = Plus / Plus
Query: 1 tcccatatggcctgacccttagggtcatatgacactggcagagacagtaatgaaaagtat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcccatatggcctgacccttagggtcatatgacactggcagagacagtaatgaaaagtat 260
Query: 61 cgtatcctgttccccactcctttgccccctaatatctaataatagaggggcatcccttct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cgtatcctgttccccactcctttgccccctaatatctaataatagaggggcatcccttct 320
Query: 121 cacaagccaggctgttagccacacaccagctctctgctcaagtgacaactggtgcctacc 180
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cacaggccaggctgttagccacacaccagctctctgctcaagtgacaactggtgcctacc 380
Query: 181 taggctcagccacttacctggagttcctagcagtagttgtaggccagcccatctcttcat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taggctcagccacttacctggagttcctagcagtagttgtaggccagcccatctcttcat 440
Query: 241 ggagtgtgtagaaaggaggccga-ctggtcccagaaaacaccctgcaggcgagcaagata 299
|||||||| |||||||||||| | ||||||||||||||||||||||||||||||||| ||
Sbjct: 441 ggagtgtggagaaaggaggcc-agctggtcccagaaaacaccctgcaggcgagcaaggta 499
Query: 300 aaacagactagggggagct-----agaaatccacatgatctctgacactaggcagtggca 354
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 500 aaacagactagggggagctgttacagaaatccacatgatctctgacactaggcagtggca 559
Query: 355 cttgttccctgtggaagacactgtaaaggtggctggtacctccctcatggtagaaaagat 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 cttgttccctgtggaagacactgtaaaggtggctggtacctccctcatggtagaaaagat 619
Query: 415 ttcaactaaacatgagttagttagtgctggctcaaaccagccagagccatacccctggga 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ttcaactaaacatgagttagttagtgctggctcaaaccagccagagccatacccctggga 679
Query: 475 cacatgggagcaaacactaagaagaaaacagtggcttttgaagtctccctttagaaaagc 534
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 cacatgggagcaaaccctaagaagaaaacagtggcttttgaagtctccctttagaaaagc 739
Query: 535 atgattagcagtccccctttacagaggaagaaactgtggcaccacctctttcagatacaa 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 atgattagcagtccccctttacagaggaagaaactgtggcaccacctctttcagatacaa 799
Query: 595 agtgacaccacttggatttcaactcaagtgtttgacacacacagat 640
| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 aatgacaccacttggatttcaactcaagtgtttgacacacacagat 845
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 640
Length of database: 1045
Length adjustment: 10
Effective length of query: 630
Effective length of database: 1035
Effective search space: 652050
Effective search space used: 652050
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
