Query= MSMg01no493_i07.b1 MSMg01no493_i07.b1 CHROMAT_FILE:
MSMg01no493_i07.b1 PHD_FILE: MSMg01no493_i07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:18:05 2005
(662 letters)
>mm_chr1_44840953_44842014
Length = 1062
Score = 654 bits (338), Expect = 0.0
Identities = 350/354 (98%)
Strand = Plus / Minus
Query: 309 gtagagaagaaacattgttgaagtactcatccacaaatgaggtatctaaatgattcatcc 368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1062 gtagagaagaaacattgttgaagtactcatccacaaatgaggtatctaaatgattcatcc 1003
Query: 369 cttaaagttcagaagaattttggaagaggagatagaaagactgtccatagattaggaagg 428
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1002 cttaaagttcggaagaattttggaagaggagatagaaagactgtccatagattaggaagg 943
Query: 429 agtgggacaaagcagtgtcatgcagataggatggaatcactgtactcataaactcccatt 488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 942 agtgggacaaagcagtgtcatgcagataggatggaatcactgtactcataaactcccatt 883
Query: 489 ggctgggatgttctgctcaacatcaagcaagttaacatttcagcatggagaagaaagggc 548
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 882 ggctgggatgttctgctcaacatcaagcaagttaacatttcagcatggagaagaaaggtc 823
Query: 549 ttcaagagcttctgacttctagttgaggaattatttatatatgttgacttctaggtatgt 608
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 822 gtcaagagcttctgacttctagttgaggaattatttatatatgttgacttctaggtatgt 763
Query: 609 gagagccagtttttttatagggcgtatcttctatgaatggacccacacttctca 662
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 762 aagagccagtttttttatagggcgtatcttctatgaatggacccacacttctca 709
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 662
Length of database: 1062
Length adjustment: 10
Effective length of query: 652
Effective length of database: 1052
Effective search space: 685904
Effective search space used: 685904
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no493_i07.g1 MSMg01no493_i07.g1 CHROMAT_FILE:
MSMg01no493_i07.g1 PHD_FILE: MSMg01no493_i07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:18:05 2005
(674 letters)
>mm_chr1_44800859_44801934
Length = 1076
Score = 1278 bits (661), Expect = 0.0
Identities = 671/675 (99%), Gaps = 2/675 (0%)
Strand = Plus / Plus
Query: 1 tcacttttcattccagtaagaatcttcaaataaaaaaaaa--cataggtatgacatgtta 58
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 201 tcacttttcattccagtaagaatcttcaaataaaaaaaaaaacataggtatgacatgtta 260
Query: 59 agaaaaataacttttgaaaaataagaattgcaaatagtcaatgcattttcatgtagtata 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agaaaaataacttttgaaaaataagaattgcaaatagtcaatgcattttcatgtagtata 320
Query: 119 tagaaactgagcaacaattgttctccttcattaagatttgggtttgaatttttgcctaac 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tagaaactgagcaacaattgttctccttcattaagatttgggtttgaatttttgcctaac 380
Query: 179 tttctcatacacactatcagctccagagggttcagtgatgggtttactaaagtctgtgtc 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttctcatacacactatcagctccagagggttcagtgatgggtttactaaagtctgtgtc 440
Query: 239 tcatggatgctcatgttcagtttcttggcagtaccgaagtggagcagccaaagggaacag 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcatggatgctcatgttcagtttcttggcagtaccgaagtggagcagccaaagggaacag 500
Query: 299 aagttgtgagagatgctgtcaggaagctgaaggtaagagctcttcagagaaacggctagt 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aagttgtgagagatgctgtcaggaagctgaaggtaagagctcttcagagaaacggctagt 560
Query: 359 gtaatgatcttgtgtcatcaacagattggcagaagctaaaacatagatatctgtttaaat 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gtaatgatcttgtgtcatcaacagattggcagaagctaaaacatagatatctgtttaaat 620
Query: 419 tactccttaaattaaaagagaacttaaattctctttaaattacaattaaataaataccac 478
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tactccttaaattaaaagataacttaaattctctttaaattacaattaaataaataccac 680
Query: 479 ctgttcagggagacattttgaattatagacatattcatgcaattatttttctgtacgtaa 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ctgttcagggagacattttgaattatagacatattcatgcaattatttttctgtacgtaa 740
Query: 539 tatatttttctatagtataattttttacagtaactaaagacttttaaggcagaactcaat 598
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 741 tatatttttctatagtataatttcttacagtaactaaagacttttaaggcagaactcaat 800
Query: 599 caatgtttatagtcagtgatctccctttctatgtcctggacaatatgtactccatgctct 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 caatgtttatagtcagtgatctccctttctatgtcctggacaatatgtactccatgctct 860
Query: 659 aaatcacaactagta 673
|||||||||||||||
Sbjct: 861 aaatcacaactagta 875
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 674
Length of database: 1076
Length adjustment: 10
Effective length of query: 664
Effective length of database: 1066
Effective search space: 707824
Effective search space used: 707824
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
