Query= MSMg01no494_c10.b1 MSMg01no494_c10.b1 CHROMAT_FILE:
MSMg01no494_c10.b1 PHD_FILE: MSMg01no494_c10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:18:55 2005
(548 letters)
>mm_chr1_76438137_76439084
Length = 948
Score = 524 bits (271), Expect = e-153
Identities = 330/385 (85%), Gaps = 54/385 (14%)
Strand = Plus / Minus
Query: 164 ctgtccagaggcagccaatgatggactgctccaatgttgtacatcccataggccacttta 223
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 948 ctgtccagaggcagccaatgatggactgctccaatgttgtacatcccataggccacttta 889
Query: 224 atgaatgaatgaatatatatacatatacatatacatatacatatacatatacatatacat 283
||||||||||||||||
Sbjct: 888 atgaatgaatgaatat-------------------------------------------- 873
Query: 284 atacatatacatatacatatacatatacatatacatatacatatacatatacatatacat 343
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 872 ----------atatacatatacatatacatatacatatacatatacatatacatatacat 823
Query: 344 atacatatacatatacatatacatatatacacattctatcagttctgttcctctgaagaa 403
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 822 atacatatacatatacatatacatatatacacattctatcagttctgttcctctgaagaa 763
Query: 404 ccctaactaatacacctaacactaaaaagatacaggttttggccataccttcattgtaca 463
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 762 ccctaactaatacacctaacactaaaaagatacaggttttggccataccttcattgtaca 703
Query: 464 tagaacaatccttctcacctctacttccttctcttccctctcaaacccctccactatccc 523
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 702 tagaacaatccttctcacctctacttccttctcttccctctcaaacccctccactatcct 643
Query: 524 tacaaatattatttggccaatcgca 548
|||||||||||||||||||||||||
Sbjct: 642 tacaaatattatttggccaatcgca 618
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 95
Number of extensions: 26
Number of successful extensions: 26
Number of sequences better than 10.0: 1
Number of HSP's gapped: 25
Number of HSP's successfully gapped: 1
Length of query: 548
Length of database: 948
Length adjustment: 10
Effective length of query: 538
Effective length of database: 938
Effective search space: 504644
Effective search space used: 504644
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no494_c10.g1 MSMg01no494_c10.g1 CHROMAT_FILE:
MSMg01no494_c10.g1 PHD_FILE: MSMg01no494_c10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:18:55 2005
(477 letters)
>mm_chr1_76252683_76253559
Length = 877
Score = 830 bits (429), Expect = 0.0
Identities = 462/483 (95%), Gaps = 19/483 (3%)
Strand = Plus / Plus
Query: 1 ttggcttattacatgagtgctaggaatcaaagtcagatccccatgttagacatggcaagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 ttggcttattacatgagtgctaggaatcaaagtcagatccccatgttagacatggcaagt 267
Query: 61 actttgccgactgagttatccccctataccaaggagattttagatttttaaacttaacag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 actttgccgactgagttatccccctataccaaggagattttagatttttaaacttaacag 327
Query: 121 catcatgatcttacttaatacacacacacacacacacacacacata------tgtatata 174
|||||||||||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct: 328 catcatgatcttacttaatacacacacacacacacacacacacacacacacatgtatata 387
Query: 175 tatatatatacatatatatatatattatatatattataatatatatattagtatatatgc 234
|||||||||| ||||||||||||| |||||||| ||||||||||||||||
Sbjct: 388 tatatatata--tatatatatatat-atatatat----------atattagtatatatgc 434
Query: 235 atataaactcagcatcttacttacactgcctaatgaactatcatcaaagaactaccagtt 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 atataaactcagcatcttacttacactgcctaatgaactatcatcaaagaactaccagtt 494
Query: 295 ctttttttatcaaggagttagtaatcagaatcataaacatcttatagattcaattctgtg 354
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 495 ctttttttatcaaggagttagtaatcagaatcataaacatctcatagattcaattctgtg 554
Query: 355 tgtgtgtatggtcagaatactaatgtttattttgggttggactttgaactatgtatccca 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 tgtgtgtatggtcagaatactaatgtttattttgggttggactttgaactatgtatccca 614
Query: 415 tgtcaacctttggcacattctgagtggctctgaagtatatggaccaggaatgtcatggag 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 tgtcaacctttggcacattctgagtggctctgaagtatatggaccaggaatgtcatggag 674
Query: 475 tgt 477
|||
Sbjct: 675 tgt 677
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 55
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 477
Length of database: 877
Length adjustment: 10
Effective length of query: 467
Effective length of database: 867
Effective search space: 404889
Effective search space used: 404889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
