Query= MSMg01no494_i18.b1 MSMg01no494_i18.b1 CHROMAT_FILE:
MSMg01no494_i18.b1 PHD_FILE: MSMg01no494_i18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:19:24 2005
(334 letters)
>mm_chr1_167956048_167956781
Length = 734
Score = 609 bits (315), Expect = e-179
Identities = 330/335 (98%), Gaps = 2/335 (0%)
Strand = Plus / Plus
Query: 1 aatggctttgaattgttgctctcttgcctgtctgcccccaatgctggggttataagcacg 60
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 201 aatggctttgaattgttgctctcttgcctgtctgctcccaatgctggggttataagcacg 260
Query: 61 tgccaccacacccgctattccatgtgctgagaatggagcccgtggtttcctgcatgctgt 120
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 261 tgccaccacacccgctattccatgtgctgagaatggagcccatggtttcctgcatgctgt 320
Query: 121 gcaagcactttgctcatggagctgcatctccaagcctaaagcattctattctaatgatcc 180
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcaagcactttgcccatggagctgcatctccaagcctaaagcattctattctaatgatcc 380
Query: 181 ttttcctttttctaaaagccc-aatttaaactttaggaaagtttaggttttaattatcaa 239
||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttttcctttttctaaaa-ccctaatttaaactttaggaaagtttaggttttaattatcaa 439
Query: 240 gtcctttagtaaatgtttttatacattatttttagagtaaattattcagtacctatgtga 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gtcctttagtaaatgtttttatacattatttttagagtaaattattcagtacctatgtga 499
Query: 300 aagggagccagatcacacccaaaggtattaaagca 334
|||||||||||||||||||||||||||||||||||
Sbjct: 500 aagggagccagatcacacccaaaggtattaaagca 534
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 334
Length of database: 734
Length adjustment: 9
Effective length of query: 325
Effective length of database: 725
Effective search space: 235625
Effective search space used: 235625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no494_i18.g1 MSMg01no494_i18.g1 CHROMAT_FILE:
MSMg01no494_i18.g1 PHD_FILE: MSMg01no494_i18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:19:24 2005
(403 letters)
>mm_chr1_168144570_168145373
Length = 804
Score = 766 bits (396), Expect = 0.0
Identities = 402/404 (99%), Gaps = 1/404 (0%)
Strand = Plus / Minus
Query: 1 ctaagaaaatataactccattgtgttatatattccttttgcaaagcttatcattttctta 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 604 ctaagaaaatataactccattgtgttgtatattccttttgcaaagcttatcattttctta 545
Query: 61 gctttagctatgtgggttttttagcttagagactttaaagactcttggcttgttatttaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 gctttagctatgtgggttttttagcttagagactttaaagactcttggcttgttatttaa 485
Query: 121 ggtccattttatgaggtgtccaataaaccatttcagtatgccaaaattggcatctgtttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 ggtccattttatgaggtgtccaataaaccatttcagtatgccaaaattggcatctgtttc 425
Query: 181 tagagctttttctcaagtagaaatttttcttccactcttaatttctgttaaggaatccaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 tagagctttttctcaagtagaaatttttcttccactcttaatttctgttaaggaatccaa 365
Query: 241 tatatactatagtaccttccactttagttactttctctttttactctttaatcgtttatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 tatatactatagtaccttccactttagttactttctctttttactctttaatcgtttatt 305
Query: 301 ctcatggcagttttctggtttctagtttctctttcaagatgaatctctgtttctttggga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 ctcatggcagttttctggtttctagtttctctttcaagatgaatctctgtttctttggga 245
Query: 361 agtttgtaatctacttaggac-ttttttttcctgttttgatttc 403
||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 244 agtttgtaatctacttaggactttttttttcctgttttgatttc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 403
Length of database: 804
Length adjustment: 9
Effective length of query: 394
Effective length of database: 795
Effective search space: 313230
Effective search space used: 313230
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
