AAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGAGCGCG
GAATTCTCTTACCTTTCATGTCACCCCTCAGTCACTTTCCATCCACTGAC
CCCTTTATTCTGCTCCCTGGGTATAAGTCCTCAGGCCTTTGCTATGTTGT
GAGTTAGCTCAACCTCTCCCTCACACTGCAATAAAGTCAACTGGCCTTAC
AGTCATTGGGAATGATGTCTTCCTTTCCATTTTACCCAATTCTCTTCTTT
TTCCTTCCACATCACTTCCCACCCTTTCTAGTCTCCCCTAAACATGCTCT
TTCTTTAAGGAAACTAGTAAGTGGTACTCAGTCTTTTCATCTTCCATTCA
GGTAGTAGAGCGAGGCTGTGATGGTGGCTAAATCAGTAGGGTGCTTGCCG
TGCAAGCATAAGGACCTGGATTCAGTGCTCAAAACCTGTACAGAAATCCA
GATTATAAGTGCTGGTTTACAGTCCTAAAATGGCAAGATGGAAGTTAGAG
ATTAGAAGCTCACTGGTCAGCTGGTCTAGCTTACAAGGTGAAGAACAAGG
TCAGTGGAAGACCCTATATCAGAGAAAATGTGGAGGGTACCTAAGGAATA
CATGTGAGGCTGCACTCTGACCACATGCTCATATGGACACACATAAACGC
ACAGGGGATCAATAGTGCATACTGGCTCATCAGACGATTTACATTCCATC
CCCAGTGCCCAGCCTGGCTGCTCCAACCGCCTATAACCCCAGAGCTGGAG

NCCACTATGATGTGNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTTCACATTAAACTGGTCTTTGCCT
GGCAGCTGATAGATAGAACTCATTGTCTCAGTAGAAGTGAGCTCACAAGG
TTAAGTGCAAATGTTCTCAGAGGTGGCCAGCCCTGTCTCGGGAAGAATGC
TAATGTCCACTTTGATACCAGTCATGCAGGGCCAACTTGGGGTTGGAACT
TTCTAGAAGCCACTTTTCTCACCACGTCCATAGCACCCAACCTTGGCGTG
CCTGCTGAACAAATGAAGTGTCCCCAAAGGACACAGGAGCCAATTAGGAA
ACAATGTTCTCTATAATCTTATTAACAAATGAATTAAAGCCATCATCAGC
CTAAGCGTTAGCCATTTCTTTCTATCCTTTCACAATATGGTTTGCTAGTG
AGTAGTATTTCTGGAAGAATTTGAAGAGATAAGAGATGAATATTATCTGA
CATTTGTGGAGTTAACTTATACCACAAAATATTGTACAATATTGTATGTT
GGGTTTTTAATGGTGATGTGGCATGGGTGACCTGGTCAATTTTTAGATTT
ATAGGATTTTAAGTTAGAGCATATGTCTCCCATTGTATTCATAGNTGCCT
TGGTATACTCAAAATTCCCTTTACAGAATTAAGGGGACTTTAATTACCTT
CTGTCCTAGTTAGGGTTTTACAGACACCATGAGCAAGGCAACTCTTA

Query= MSMg01no495_j22.b1 MSMg01no495_j22.b1 CHROMAT_FILE:
MSMg01no495_j22.b1 PHD_FILE: MSMg01no495_j22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:20:43 2005
         (628 letters)



>mm_chr1_127547579_127548606
          Length = 1028

 Score = 1160 bits (600), Expect = 0.0
 Identities = 618/624 (99%)
 Strand = Plus / Minus

                                                                       
Query: 4   gaattctcttacctttcatgtcacccctcagtcactttccatccactgacccctttattc 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 698 gaattctcttacctttcatgtcacccctcagtcactttccatccactgacccctttattc 639

                                                                       
Query: 64  tgctccctgggtataagtcctcaggcctttgctatgttgtgagttagctcaacctctccc 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 tgctccctgggtataagtcctcaggcctttgctatgttgtgagttagctcaacctctccc 579

                                                                       
Query: 124 tcacactgcaataaagtcaactggccttacagtcattgggaatgatgtcttcctttccat 183
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 tcacactgcaataaagtcgactggccttacagtcattgggaatgatgtcttcctttccat 519

                                                                       
Query: 184 tttacccaattctcttctttttccttccacatcacttcccaccctttctagtctccccta 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 tttacccaattctcttctttttccttccacatcacttcccaccctttctagtctccccta 459

                                                                       
Query: 244 aacatgctctttctttaaggaaactagtaagtggtactcagtcttttcatcttccattca 303
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 458 aacatgctctttctttaaggaagctagtaagtggtactcagtcttttcatcttccattca 399

                                                                       
Query: 304 ggtagtagagcgaggctgtgatggtggctaaatcagtagggtgcttgccgtgcaagcata 363
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 398 ggtagtagagcgaggctgtgatggtggctaaatcagtagggtgcttgccttgcaagcata 339

                                                                       
Query: 364 aggacctggattcagtgctcaaaacctgtacagaaatccagattataagtgctggtttac 423
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 aggacctagattcagtgctcaaaacctgtacagaaatccagattataagtgctggtttac 279

                                                                       
Query: 424 agtcctaaaatggcaagatggaagttagagattagaagctcactggtcagctggtctagc 483
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 278 agtcctaaaatggcaagatgggagttagagattagaagctcactggtcagctggtctagc 219

                                                                       
Query: 484 ttacaaggtgaagaacaaggtcagtggaagaccctatatcagagaaaatgtggagggtac 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 ttacaaggtgaagaacaaggtcagtggaagaccctatatcagagaaaatgtggagggtac 159

                                                                       
Query: 544 ctaaggaatacatgtgaggctgcactctgaccacatgctcatatggacacacataaacgc 603
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 158 ctaaggaatacatgtgaggctgcactctgaccacatgctcatatggacatacataaacgc 99

                                   
Query: 604 acaggggatcaatagtgcatactg 627
           ||||||||||||||||||||||||
Sbjct: 98  acaggggatcaatagtgcatactg 75


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 628
Length of database: 1028
Length adjustment: 10
Effective length of query: 618
Effective length of database: 1018
Effective search space:   629124
Effective search space used:   629124
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no495_j22.g1 MSMg01no495_j22.g1 CHROMAT_FILE:
MSMg01no495_j22.g1 PHD_FILE: MSMg01no495_j22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:20:43 2005
         (625 letters)



>mm_chr1_127497825_127498849
          Length = 1025

 Score = 1195 bits (618), Expect = 0.0
 Identities = 623/625 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttcacattaaactggtctttgcctggcagctgatagatagaactcattgtctcagtagaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttcacattaaactggtctttgcctggcagctgatagatagaactcattgtctcagtagaa 260

                                                                       
Query: 61  gtgagctcacaaggttaagtgcaaatgttctcagaggtggccagccctgtctcgggaaga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtgagctcacaaggttaagtgcaaatgttctcagaggtggccagccctgtctcgggaaga 320

                                                                       
Query: 121 atgctaatgtccactttgataccagtcatgcagggccaacttggggttggaactttctag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atgctaatgtccactttgataccagtcatgcagggccaacttggggttggaactttctag 380

                                                                       
Query: 181 aagccacttttctcaccacgtccatagcacccaaccttggcgtgcctgctgaacaaatga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aagccacttttctcaccacgtccatagcacccaaccttggcgtgcctgctgaacaaatga 440

                                                                       
Query: 241 agtgtccccaaaggacacaggagccaattaggaaacaatgttctctataatcttattaac 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agtgtccccaaaggacacaggagccaattaggaaacaatgttctctataatcttattaac 500

                                                                       
Query: 301 aaatgaattaaagccatcatcagcctaagcgttagccatttctttctatcctttcacaat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaatgaattaaagccatcatcagcctaagcgttagccatttctttctatcctttcacaat 560

                                                                       
Query: 361 atggtttgctagtgagtagtatttctggaagaatttgaagagataagagatgaatattat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atggtttgctagtgagtagtatttctggaagaatttgaagagataagagatgaatattat 620

                                                                       
Query: 421 ctgacatttgtggagttaacttataccacaaaatattgtacaatattgtatgttgggttt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ctgacatttgtggagttaacttataccacaaaatattgtacaatattgtatgttgggttt 680

                                                                       
Query: 481 ttaatggtgatgtggcatgggtgacctggtcaatttttagatttataggattttaagtta 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttaatggtgatgtggcatgggtgacctggtcaatttttagatttataggattttaagtta 740

                                                                       
Query: 541 gagcatatgtctcccattgtattcatagntgccttggtatactcaaaattccctttacag 600
           |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 741 gagcatatgtctccaattgtattcatagttgccttggtatactcaaaattccctttacag 800

                                    
Query: 601 aattaaggggactttaattaccttc 625
           |||||||||||||||||||||||||
Sbjct: 801 aattaaggggactttaattaccttc 825


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 625
Length of database: 1025
Length adjustment: 10
Effective length of query: 615
Effective length of database: 1015
Effective search space:   624225
Effective search space used:   624225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)